ggKbase home page

PLM3_60_coex_sep16_scaffold_2111_1

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(159..671)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor NrdR bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 161.0
  • Bit_score: 285
  • Evalue 2.60e-74
nrdR; transcriptional regulator NrdR similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 157.0
  • Bit_score: 194
  • Evalue 1.30e-47
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 300
  • Evalue 1.40e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAGATGCCCGTTCTGCGGCCACACCGAGGATCGCGTCGTCGACTCGCGGGTCGGCCGCGACGGTGAGTTCATCCGGCGCCGGCGCGAGTGTCTCAAGTGCCACCGCCGCTACACGACCTACGAGTACATCGAGGACGTCCTGCCCCACGTGGTGAAGCGCGACGGGCGGCGCGAACCGTTCGACCGCCAGAAGCTCCGCGGCTCCCTGCTCAGGGCGTGCGAGAAGCGCTCGATCGCCATCCAGGCGGTCGACAACGTCGTCGGCGACATCGAGGCCAAGCTCCACGAGCGCGCCGAGAAGGAGATCTCCAGCCAGGAGCTCGGCGACATGGTCATGGAGCAGCTGCAGCGTCTGGACCAGGTGGCCTACGTCCGCTTCGCGTCGGTGTATCGCCAGTTCAAGGATATCGCCCAGTTCATGGACGAGGTGAAGGGCCTGCTCAAGGAGGACAAGAGCAAGCCGGCGCCGGCGGCCAAGCCTCGCGCTCAGGTGGGTCGCGTGGCCAGATAG
PROTEIN sequence
Length: 171
MRCPFCGHTEDRVVDSRVGRDGEFIRRRRECLKCHRRYTTYEYIEDVLPHVVKRDGRREPFDRQKLRGSLLRACEKRSIAIQAVDNVVGDIEAKLHERAEKEISSQELGDMVMEQLQRLDQVAYVRFASVYRQFKDIAQFMDEVKGLLKEDKSKPAPAAKPRAQVGRVAR*