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PLM3_60_coex_sep16_scaffold_4320_6

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(4884..5642)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 180.0
  • Bit_score: 110
  • Evalue 1.70e-21
multi-component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 217.0
  • Bit_score: 102
  • Evalue 1.70e-19
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 180.0
  • Bit_score: 110
  • Evalue 2.40e-21

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGACGGGCCTCGGCCGTGTCCTCGTGGTGGACGACGAGCCCGCACTGCGAGAGACGTTTCGCGCGATCCTCGAGGCCCTGGGCTACGAAGCCAGCACCGCGGCGAGCGGCGAGCAGGCCATCGCCGACATGGCCAGGGTCCGGCCCGACCTCGTGTTGCTGGACCTGATGATGCCGGGGATCTCGGGCCTGGAGGCGCTGACGCATTTCCGACAGCATCACCGCACGGTACCGGTGATCGTCATCACCGGGAACCCGGACCCGGCGATCGCCCGTGAGGCCCGCGCCGGCGGCGCGGTCGACGTTCTCGGAAAGCCGGTCGACTTCACCGCCATGAAGAGCGTGGTCGCGTGGGCCATGGGGCTGGCGCCGGGGCGCGTGACCTTCGAACCCCTCGCCGGCATTCGCCTCGTCATCGCAGAAGACCACGATGACACGCGAGACGTCCTGGAGCAGGTTCTACGGCGTCTGGGCGCTACGGTCACGGCGGTCGCCCTCGCCCGCGAGGCGCTCGGCATGGTGTCGGCGGCGGACATCATCGTGACCGACCTCGCGATGCACGAAGAGGACGGTGTCTGGCTACTGGAACAGGTGAACCAGCACCCGCGTTCCATCCCGGTCATCGCGGTGAGCGGGGCCGCTGAGAGCCAAGTGCCCCGCATGGCGCAGGCGCCCTTCGCCAGGAAGCTGCTGAAGCCGGTCGATCCTTGGGCGCTGGCCGACGTGATCGCTGAGGTGCTTCATGGTCGACCGTCGTGA
PROTEIN sequence
Length: 253
VTGLGRVLVVDDEPALRETFRAILEALGYEASTAASGEQAIADMARVRPDLVLLDLMMPGISGLEALTHFRQHHRTVPVIVITGNPDPAIAREARAGGAVDVLGKPVDFTAMKSVVAWAMGLAPGRVTFEPLAGIRLVIAEDHDDTRDVLEQVLRRLGATVTAVALAREALGMVSAADIIVTDLAMHEEDGVWLLEQVNQHPRSIPVIAVSGAAESQVPRMAQAPFARKLLKPVDPWALADVIAEVLHGRPS*