ggKbase home page

PLM3_60_coex_sep16_scaffold_7205_7

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(4320..5522)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 400.0
  • Bit_score: 596
  • Evalue 1.20e-167
putative branched-chain amino acid ABC transporter substrate binding protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 409.0
  • Bit_score: 431
  • Evalue 1.50e-118
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 399.0
  • Bit_score: 634
  • Evalue 9.70e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGAACTCGAAGTACCTGCGCGGCGTCCTGGTCCTCGGCCTGGCGCTGGCCGTCGCCCTGTTACCGGGAGCCTCCCCGCTCCAGGCCCAGGGCAAAGGCACCATCAAGATCGCCACCCAAAGCCCGCTGTCGGGCGGCCAGGCGGCACTTGGTGAAGGCATCAAGCTCGGCGCCCAGCTCGCCATCGACAAGTTCAAAGGCAATCTCGAGAAGGCGGGCTTCAAAGTCGATCTCGTGCCGTTCGACGACCAGGCCAAGCCGGACGTCGGCGTGGCCAACAGCAAGAACATCATCGCCGACAAGGACATCCTGGCGGTCATCGGCCACCTGAACTCCGGCGTCGCGATTCCGTCGTCGGAGGTCTACAAGGAAGTCAGCCTCGCCATGATCTCGCCCGCCAACACGAACCCGACCGTCACCGACCGCGGCTACGGCAACGTCAACCGCGTGTGCGGGCGCGACGACGTGCAGGGCGTGGTGGGCTCGGAGTTCGCGGCCGGCACCGTGAAGGCCAAGAGCGTCTACATCGTGCACGACAAGACCACCTACGGGCAGGGCGTGGCCGAGTTCTTCCGCGACGACGCCAAGAAGAAGGGCCTCACCGTGGCCGGCTTCGACGGCACCGAGGAGAAGTCGAACTTCGATGCGATCCTGACCCCGATCAAGGCCAAGAACCCGAGCCTCATCTACTTCGGCGGCATCTACGACCAGGGCGCGCCGTTCTTCAAGCAGGCCAGCGAGAAGGGCATCAAGGCGAAGTTCATGGGCCCCGACGGCATGGACTCCTCCGACCTCACCAAGATCGCGGGCAAGGCCGTCGTCGGCATGTACTACACGTCGGCGGCGGGTCCGGCCTCGGCGCTGGCCGGCGCCAAGGGCTTCGTGGACGACTTCAAGAAGAAGTTCAGCAAGAACCCGGAGCCGTACGCCGCCGAGGCCTACGACGCGACCGCGATCGCGCTGAAGGCCATCGAGGCCGCGGCCAAGGGGGGCAAGGTCCCGAGCCGCGAGGACGTCTCGACGGCGATCCGCAGCGTGAAGCACAAGGGCATCACCGGCGAGATCGAGTTCGACGGCAAGGGCGACCGCAAGAAGGCGCTCTACTTCGTGCTCCAGGTCGTCAGCGACAACCCCGAGAAGTGGGGCGACAACAAGATCGTCAAGCAGCTCACGATCGCGGCGCCGGCCGCCGCGAAGAAGTAG
PROTEIN sequence
Length: 401
MNSKYLRGVLVLGLALAVALLPGASPLQAQGKGTIKIATQSPLSGGQAALGEGIKLGAQLAIDKFKGNLEKAGFKVDLVPFDDQAKPDVGVANSKNIIADKDILAVIGHLNSGVAIPSSEVYKEVSLAMISPANTNPTVTDRGYGNVNRVCGRDDVQGVVGSEFAAGTVKAKSVYIVHDKTTYGQGVAEFFRDDAKKKGLTVAGFDGTEEKSNFDAILTPIKAKNPSLIYFGGIYDQGAPFFKQASEKGIKAKFMGPDGMDSSDLTKIAGKAVVGMYYTSAAGPASALAGAKGFVDDFKKKFSKNPEPYAAEAYDATAIALKAIEAAAKGGKVPSREDVSTAIRSVKHKGITGEIEFDGKGDRKKALYFVLQVVSDNPEKWGDNKIVKQLTIAAPAAAKK*