ggKbase home page

PLM3_60_coex_sep16_scaffold_12128_6

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(5074..5754)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT8_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 224.0
  • Bit_score: 279
  • Evalue 1.90e-72
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 224.0
  • Bit_score: 279
  • Evalue 5.30e-73
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 223.0
  • Bit_score: 342
  • Evalue 3.30e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGCGGATCCTGGTCGTCGAGGACGAGCGGAAGGTCGCCAGCTTTATCCGTCAAGGACTGACCGAGGAAGGCCACACCGTCGAGGTGGCGGCCGACGGCGCCACCGCGCTCGACCTGATCCTCGACGGCTCGCCCTACGACCTCGTCGTCCTCGATCTCATGCTGCCCCGCCTGGACGGCTTCGCGATCCTCAAGGCCGCCCGCGCGCGCCGGATCGTCACGCCGGTCCTGGTCCTCACCGCTCGCGACAGCGTGGCCGAGAAGGTGCGGGGCCTGGACCTCGGCGCCGACGACTACCTGACCAAGCCCTTCGCCTTCGACGAGTTCCTGGCCCGCGTGCGCGCGCTCCTGCGCCGGGGCGCGGCCGGCACCGGCCCCGTGCTCCGCGTGGCCGATCTCACCCTCGATCCCGCCACCCGCGAGGTGCGCCGCGGCGCCCGGCGCATCGGCCTCACCGCGCGCGAGCACGCGGTGCTGGAGTACTTCCTGCGCAACCCCGGCCGCGTGCTCACGCGCCCGATGCTGGCCGAGCACGTGTGGGGGCTCGACTTCGATCCGGAGAGCAACATCGTCGACGTGTACGTCGGCTACCTGCGGCGCAAGATCGACGGGCCCGGCGAGCCGCGCCTGCTGCACACGGTGCGCGGCGCCGGGTACGTGCTCAGGAGCGAGGCGGAGTGA
PROTEIN sequence
Length: 227
VRILVVEDERKVASFIRQGLTEEGHTVEVAADGATALDLILDGSPYDLVVLDLMLPRLDGFAILKAARARRIVTPVLVLTARDSVAEKVRGLDLGADDYLTKPFAFDEFLARVRALLRRGAAGTGPVLRVADLTLDPATREVRRGARRIGLTAREHAVLEYFLRNPGRVLTRPMLAEHVWGLDFDPESNIVDVYVGYLRRKIDGPGEPRLLHTVRGAGYVLRSEAE*