ggKbase home page

PLM3_60_coex_sep16_scaffold_14666_2

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(284..1564)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 413.0
  • Bit_score: 578
  • Evalue 3.70e-162
branched-chain amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 388.0
  • Bit_score: 380
  • Evalue 5.40e-103
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 413.0
  • Bit_score: 578
  • Evalue 5.20e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGATCCGGCAACGGAGCCCGAAGCTCGCCCTGACCCTGGTCGCCGCGGTGGTGATGGTGACGCTGCTGCTCGCGAGCGGAGGGACGTTCCTCGCCCGGGGCGCTGACCCCATCAAGATCGGGTTCGGCATGGCGCTGACCGGCGGCCTGTCGGCCAACGGCAAGCCCGCACTCCTCGCCGTGCAGATCTGGAAGGACGACGTCAACAAGAGAGGCGGATTCCTCGGCCGGCCGGTGGAGCTCGTCTACTACGACGACCAGACCAACCCCGCCACCGTGCCCGGGATCTACACCAAGCTGCTCGACGTCGACAAGGTCGACCTCGTCATCTCCGGTTATGGCACCAACCTCATCGCGCCGCTCATGCCCATCGCGATGGAGCGCAAGCTGACCATCATGGGGATGTTCGGGCTGGCCAACAACGAGAAGTACCAGTACCCGAACTACTTCCAGATCCAGCCGGCCGGGCCGGATCCGCAGACCAGCATGCCCATCGGGTTCTTCGAGCTGGCGGCGAGGCAGACCCCCAAGCCGCAGACGGTGGCGCTGGTCGGCGCCGACGCCGAGTACCCGCAGAACGCCATGATCGGGGCGCGCGAGCTGGTCAAGAAGTTCGGCTTCAAGACCGTCTACGACAGGAACTACCCACCCAGCACCGTCGACTACACGCCGATCGTGCGGGCCATCAAGGCCACCAACGCCGACATCGTGTTCGTGGCCTCGTACCCGCCGGACTCGGTCGGGATGCTGCGCGCGGCGCTCGAGGTCGGGCTGCAGCCCAAGATCTTCGGCGGGGGCATGGTCGGGCTGCAGTTCACCAGCGTGATGCAGAGCATGGGGCCGTCGCTGAACGGGATCGTCAACTACGACTTCTGGGCGCCGGAGCCCACGATGCTGGCGATGCCCGGTATCAAGGAGTTCCTGAAGGAGTACCAGGCGCGGGCCGAGAAGGCCGGGGTCGATCCGCTCGGGTACTATCTGCCGCCCTACTCGTACGCCCTGGTCCAGGTGCTCGGCCAGGCCATCGAGGCCACCAAGAGCCTCGACCAGCAGAAGCTGGCCGACCACATCCGGAGCACCGAGTTCAGCACGCTCATCGGCAAGGTGAGGTTCGGGAAGAACGGCGAGTGGGCCAAGGGGCGCACCCTCATGGTCCAGTACCAGAAGATCCAGGGGACGGGGATCGATCAGTTCCGGGGGCCGGGCAAGAAGATCGTGCTCTACCCCGACGAGCTCAAGTCCGGGAACATCATCTACCCGTACGCCGCGGCGAAGAACTAG
PROTEIN sequence
Length: 427
MIRQRSPKLALTLVAAVVMVTLLLASGGTFLARGADPIKIGFGMALTGGLSANGKPALLAVQIWKDDVNKRGGFLGRPVELVYYDDQTNPATVPGIYTKLLDVDKVDLVISGYGTNLIAPLMPIAMERKLTIMGMFGLANNEKYQYPNYFQIQPAGPDPQTSMPIGFFELAARQTPKPQTVALVGADAEYPQNAMIGARELVKKFGFKTVYDRNYPPSTVDYTPIVRAIKATNADIVFVASYPPDSVGMLRAALEVGLQPKIFGGGMVGLQFTSVMQSMGPSLNGIVNYDFWAPEPTMLAMPGIKEFLKEYQARAEKAGVDPLGYYLPPYSYALVQVLGQAIEATKSLDQQKLADHIRSTEFSTLIGKVRFGKNGEWAKGRTLMVQYQKIQGTGIDQFRGPGKKIVLYPDELKSGNIIYPYAAAKN*