ggKbase home page

PLM3_60_coex_sep16_scaffold_15469_3

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 1294..1611

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein Tax=Methylobacter tundripaludum SV96 RepID=G3IYD6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 88.0
  • Bit_score: 70
  • Evalue 1.00e-09
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 88.0
  • Bit_score: 68
  • Evalue 1.10e-09
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 95.0
  • Bit_score: 75
  • Evalue 2.70e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCGAAGCGCAAGACGCTTATGGATGAGTTCCGCGAGGAGCTCGTGAACGATCGGGAACTGAACGGACTCTATCAGCGTGAGCTGGCAAAGCTGAGGCTAGCGAACCAGATCTTGGCGGCGCGGACACACGCGGGGTTGACCCAGGCCGCGCTGGCGAGGCGAATTGGGACCCAGCAAACCGGTGTCGCGAGGATGGAGAGCGCTGGATATGCCCGTTGCACCGTTTCGACGCTGGCCAAGATCGCAGCCGCGACCGGATCCCGGCTAGAGGTGCGCCTGGTCATCGGCGGCCGGCGCCTCGCCATGGCCAAATAG
PROTEIN sequence
Length: 106
MAKRKTLMDEFREELVNDRELNGLYQRELAKLRLANQILAARTHAGLTQAALARRIGTQQTGVARMESAGYARCTVSTLAKIAAATGSRLEVRLVIGGRRLAMAK*