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PLM3_60_coex_sep16_scaffold_16542_2

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 1178..2611

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit bin=GWF2_Methylomirabilis_70_14 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 420.0
  • Bit_score: 407
  • Evalue 1.60e-110
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 441.0
  • Bit_score: 398
  • Evalue 2.20e-108
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 428.0
  • Bit_score: 414
  • Evalue 1.10e-112

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Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGACGCGCTCACGTGGTGTCCACGTTTTCCTCGCGGCGCTGGTGGTGGTGGCGGCGACGGCGGCGTGCTCCGGTGGCAATGCGGAGTCGAAGCCGCAGCCGCAGCCAGTCCGCCGCCCCGCGGTGCCGGTGGCGGTCGCCGCCGTGGAGCGCAAGGAGATGCCGATCCAGATCCAGGCGATCGGCACGGTCGAGGCGTACGCCGTGGTGTCGATCAAGGCCCAGGTCGGCGGCGAGCTCATGCGGGTCCACGTCAAGGAAGGCCAGGACGTGCGCAAGGGCGACCTGCTGTTCAGCATCGACCCGCGCACCTACGAGGCCACGCTCGCCCAGGCCCAGGCGAACCTGGCCAAGGACCAGGTGCAGGTGCAGCAGGCGCGCGCGGTGCTCCAGCGGGACATCGCGCGGGTCGGCCAGGCGCGCGCGAATCTGGTGCGTGACCAGGCCCAGTCCACCAACGCGCAGGCCCAGGAGCGACGCTACTCCGATCTCCTCGGCAAGGAGCTGGTCTCGCGCGAGCAGTACGACCAGGTCAAGGCCAACGCCGAGTCGCTCACGGCCACCCTCCGCGCCGACGAGGCGGACGTGCGGAGCGCGGAGGAGACCGTCCGCGCCGACGAGGCGGCCATCCGCAGCGCCGAGCAGACCGTGCGCGCCGACGAGGCGGCGGTGGAGAACTCGCGCCTGCAGCTCGGCTACACGACGATCCGCTCGCCCGTGAACGGCCGGGCCGGCAGCCTCGGCATGAACGAAGGCAACGTCGTCCGGTCGACGGGCACGAACGACTCCACGCTGCTCGTCATCAATCAGGTGGAGCCGATCTACGTGTCGTTCACCGTGCCCCAGCAGCAGCTGGCCGAGATCAAGCGCTACATGGCCGATGCCACGCTGGCGGTGGACGCGGTGCCCAGCGGCGAGGCGCGACCCGTGCGGGGAGCGGTGACGTTCATCGACAACGCGGTCGACGTGACGACGGGCACCATCCGGCTCAAGGCGACCTTCGCCAACCACGAGCGGCGGCTGTGGCCGGGCCAGTTCGCCAACGTCTCGCTCACGCTGGCCCTGCAGCCCGACGCCCTCGTCATCCCCTCGCAGGCGCTGCAGACGGGCCAGCAGGGCGCCTTCGTGTTCGTGGTGAAGCCCGACGCCACCGTGGAGACACGGCGCGTCGTGATCGCGCGCGCGCAAGGTAACGAGACCGTCGTCGCCAGCGGGCTGCAGGCCGACGAGCAGGTGGTGACGGACGGACAGACGCGGCTCACCGGTGGCGCCAAGGTCGAGGTCAGGGCCCCGGCCGGCCGCCCGGGCGGCGGCGAGCGTCCGCGCGAGGCGGGCGGCGGGGCTCCCGCCAAGCCCGAGGGCGCGAAGGACCCGGCCGCCGCGAAGGCGGCGCCGGCGCCGGCAAAGGATGCGAAAGACACTCCGAGGAGGTAG
PROTEIN sequence
Length: 478
MTRSRGVHVFLAALVVVAATAACSGGNAESKPQPQPVRRPAVPVAVAAVERKEMPIQIQAIGTVEAYAVVSIKAQVGGELMRVHVKEGQDVRKGDLLFSIDPRTYEATLAQAQANLAKDQVQVQQARAVLQRDIARVGQARANLVRDQAQSTNAQAQERRYSDLLGKELVSREQYDQVKANAESLTATLRADEADVRSAEETVRADEAAIRSAEQTVRADEAAVENSRLQLGYTTIRSPVNGRAGSLGMNEGNVVRSTGTNDSTLLVINQVEPIYVSFTVPQQQLAEIKRYMADATLAVDAVPSGEARPVRGAVTFIDNAVDVTTGTIRLKATFANHERRLWPGQFANVSLTLALQPDALVIPSQALQTGQQGAFVFVVKPDATVETRRVVIARAQGNETVVASGLQADEQVVTDGQTRLTGGAKVEVRAPAGRPGGGERPREAGGGAPAKPEGAKDPAAAKAAPAPAKDAKDTPRR*