ggKbase home page

PLM3_60_coex_sep16_scaffold_18487_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(2123..4417)

Top 3 Functional Annotations

Value Algorithm Source
Putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (Pilus type IV) bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 793.0
  • Bit_score: 563
  • Evalue 2.90e-157
fibronectin type III similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 163.0
  • Bit_score: 70
  • Evalue 2.20e-09
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 805.0
  • Bit_score: 600
  • Evalue 2.30e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2295
GTGGTCCTGCGCAAGACGGCCGCCTTCGGGACCGAGGTGCCGGCGTCGGGCGTGAGCTACGCCGTGAACGACGCGATCGGCGCGGCCACCGTCGTGTACGCCGGCTCCGCCCAGACCGTCACCCAGACCGGGCTCACCAACGGCACGGCCTACTACTACAAGACGTTCGCGCAGGACGCGACGCCGTGCTACTCGGCAGGCGACGCCCTGAAGACGACGCCGGTCGCGGGGCCGGCCCCGGCCTGGAGCTACACGATGGCCGGCGGCTCGATGCTGAACGGTGGCTTCGCCGGCGACGGCACCGTCTACACCTCCTCGAACGCCAACAACATCGTGTCGCTGAACACCGCCGACGGCACCCAGACGTGGAGCCCGCTGGCGACGACCGCGGCAATCCAGGGCAACCTCACCCCGCTTCCGGCCGAGACCGGGATCCACACGGTCCTGAGCGGCACCGCGACGATGACGACCCAGAGCGTGCTGAACGTGCCCATCGCCACGGTCGACCTCAGCCGGGCCGTGCTGTTCATGAGCGTCTCCGCGGACAACGTCGACCCCAACAACGGCCTCGTGCGCGGGCAGCTCACGAGCTCGACGAACATCCAGTTCAATCGCCCGGGCACCGCGACGACCGTCACCATCAAGTGGCACGTCGCCGTGTTCAGCCGCTCCGTCTCCGTGCAGCGCGGCACCACCAGCGTGACGGCCCAGCCGATGAACGTGGCCATCACCGCCGTCGACCGCACCAAGACGTTCGTGCTCGTTTCCTGGCAGAAGCTCGGCGCCACCTACGGCGCCGACGACATCGTCCGGGCCCGGCTGACGTCGAACACGAACCTCGAGCTCACCCATGGGACCGGCTCCCTGGACGGCATCGCCGACTGGCAGGTCGTGACCATGGACCTGGCGTCGGTCCAGTACGGCGACGTCACCATCGCCAGCGGGGCCTTGACGGCGACGGCGGCGGTCACCGCGGTCGACACGACGAAGACGTTCCTGATCGCCTCGTGGTCGAGCGACGGTGGCAGCATCGGCGCGAACTTCATCGGCCTCACCTGGTACCTGGTGACGCTCAACGACGGATCGACCGTGCAGTCGGGCAACGCGACTTTCGGCACCGGCGCGACGCTCGTCTCGGCCACGCTGCCGACCGCCGTGAGCCTCACCAACACCGTGGCCTTCCTCTCCGGCAACCAGCGCGGGGGCAGCACGCCGGACCCGGGCACCGCCCCCAACGACAACCCGGGCGTCGCCTGGTTCCGCGCGGACCTGACCGGCACCACCACGCTGCAGGTGAGCCGCGCCACCGTCGGCGCCGGCGTGACCGCGGATGCGGCCTGGTTCGTCGTCAACTTCGCCTCGGCGCCCGGCGCCGCGGTGTTCGGCGGTGACCAGAGCGGGCGGGTCTACTACGTGGACACCGCGGTCGGGCTCACGGACTGGGCGACGACGTTGACCGGGGCGGACACCGTGCAGGCGGCCACGACCGCCGCACTGCTCACCTACTCCAACGCCGCGTTCAAGGCGGTCTCCAATGACGACCTGCTGTTCGCGGCGACGCGCAACGTCAGCACGACCACCAACCAGGTGTTCGCGATGCGCGCCAGCGACGGGGCGCTGCGGTGGACGTTCAACGGCACCGGCACCTACCAGATGGACTACGTCGTCGGCACGCCCTGGCTGGACTACGCGCGGAACCGGTTGTACGTCGCGAGCCGGGCCGGCACCGTGGGCACCCAGCCGAGCCTCTGGGTGATCAACGCGCTCGACGGCACGCTCGTGCAGTCGTTCGCGCTCGGGCACCTGCAGTCGTCGCCGACGCTGAGCTACGACGAGACGACGCTGTACGTGGGCAACACCACCGGCAACTTCTACGCGATCAACCTGAACACAGTGGCGCTGAAGTGGACCACGCCCTCGGCGCTCGGCTCAGCACTGATCGGCTACGTGTGGGAGGACGCCTCGATCGCCGGGCGCCTGTACTTCACCACGGCCGACGGCAACGTCTGGTGCGTGCAGGATCCGGGCGCTGGCCTGCCCCCGAACCCGGCCAGCCCGGTGTGGAAGCGCGCCGTCGCCGGCGCCTCGACGCCCCTGCTGATCGACAAGCTCTACGTCGGCTCCACCGACGGCAAGGTCCACCAGATCGAGCCGAGCACCGGCGTCGACGAGACGCAGTTCACGGTTGGCGACGGGACCTCCACGGTGGGAACGCCGACCACCGAGGACAGCGCCCAGCTCTTCGTCGGCACCACGGCCGGGACGCTCTACAAGATCCCGCTGCCGCTCCCCTAG
PROTEIN sequence
Length: 765
VVLRKTAAFGTEVPASGVSYAVNDAIGAATVVYAGSAQTVTQTGLTNGTAYYYKTFAQDATPCYSAGDALKTTPVAGPAPAWSYTMAGGSMLNGGFAGDGTVYTSSNANNIVSLNTADGTQTWSPLATTAAIQGNLTPLPAETGIHTVLSGTATMTTQSVLNVPIATVDLSRAVLFMSVSADNVDPNNGLVRGQLTSSTNIQFNRPGTATTVTIKWHVAVFSRSVSVQRGTTSVTAQPMNVAITAVDRTKTFVLVSWQKLGATYGADDIVRARLTSNTNLELTHGTGSLDGIADWQVVTMDLASVQYGDVTIASGALTATAAVTAVDTTKTFLIASWSSDGGSIGANFIGLTWYLVTLNDGSTVQSGNATFGTGATLVSATLPTAVSLTNTVAFLSGNQRGGSTPDPGTAPNDNPGVAWFRADLTGTTTLQVSRATVGAGVTADAAWFVVNFASAPGAAVFGGDQSGRVYYVDTAVGLTDWATTLTGADTVQAATTAALLTYSNAAFKAVSNDDLLFAATRNVSTTTNQVFAMRASDGALRWTFNGTGTYQMDYVVGTPWLDYARNRLYVASRAGTVGTQPSLWVINALDGTLVQSFALGHLQSSPTLSYDETTLYVGNTTGNFYAINLNTVALKWTTPSALGSALIGYVWEDASIAGRLYFTTADGNVWCVQDPGAGLPPNPASPVWKRAVAGASTPLLIDKLYVGSTDGKVHQIEPSTGVDETQFTVGDGTSTVGTPTTEDSAQLFVGTTAGTLYKIPLPLP*