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PLM3_60_coex_sep16_scaffold_30743_3

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 1120..1722

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 186.0
  • Bit_score: 254
  • Evalue 7.50e-65
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 184.0
  • Bit_score: 128
  • Evalue 1.70e-27
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 187.0
  • Bit_score: 256
  • Evalue 2.80e-65

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGGAAGGTGGGCGGTAGGGGTCGCGTTGACTCAGGAGATTTCGGATGAGACGCTTTGCCGGCGTGTCGCTGCTCAGGACGAGGCCGCCTTCGACGTGCTCGTGGGGCGCTATCAGGGCCGCGCGTACCGGCTGGCGTGGTCGCTCCTGCGCAGCGCCGAGGACGCGCGCGACGTCTCGCAGGAAGCCTTCCTGCGCGTGTATCGGACGGCCGGGGGCTTTCGCGGCGACGCCCGGTTCTCGACCTGGTTCTATCGCATCCTCGTCAACCTGTGCCTCGACCACCAGCGCCGCGGCCGCTGGTGGCAGCGGCTGCTGGTCCGCGACGACGGCGCCGGCGATCCCGAGCGCGGGGTACTCGAGCGCCAGCCGGCGCCGGTCGCCGATCCCGGCGACGCGCTCGGCCGCCAGCAGGTGATGGCGCGGCTGTGGGCCGCGGTCGATCGGCTCTCGCCGCAGCAGCGGGCGGCAATCGTGCTTCACGTGCAAGAGGAGCTGCCGACGAGCCAGATCGCCGAGGTGCTGAAGTGCTCGGAGGCGACAGTCCGGGTGCATCTGCACCGGGCGGTGGGCGCGCTCCGCAAGATCGTGACCAGGGATTGA
PROTEIN sequence
Length: 201
MGRWAVGVALTQEISDETLCRRVAAQDEAAFDVLVGRYQGRAYRLAWSLLRSAEDARDVSQEAFLRVYRTAGGFRGDARFSTWFYRILVNLCLDHQRRGRWWQRLLVRDDGAGDPERGVLERQPAPVADPGDALGRQQVMARLWAAVDRLSPQQRAAIVLHVQEELPTSQIAEVLKCSEATVRVHLHRAVGALRKIVTRD*