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PLM3_60_coex_sep16_scaffold_18584_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: 1280..2839

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 Tax=Actinomadura atramentaria RepID=UPI00037ED3A1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 519.0
  • Bit_score: 626
  • Evalue 1.40e-176
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 517.0
  • Bit_score: 626
  • Evalue 5.30e-177
RNA binding S1 domain protein {ECO:0000313|EMBL:ACY98395.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 517.0
  • Bit_score: 626
  • Evalue 2.60e-176

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
TTGACCGAGTCCACCGAGCGACCCACCGCAACCGAGCAGGACGTCCCTGGGGTTACCACCCAGGTGACACAGAACGATGTCGGCTCCGCCGAGGACCTCGCGGCCGCCTACGAAGAGTCGCTGAAGGCCTTCGAAGAGGGTGACATCGTCGACGGCTACGTGGTGAAGGTCGACCGCGACGAGGTGCTGCTCGACATCGGCTACAAGTCCGAAGGCGTCATCCCCTCCCGCGAGCTGTCCATCAAGCATGACGTCGACCCCAACGAGGTCGTCAGTCTCGGTGACCACATCGAGGCCCTGGTCATGCAGAAGGAGGACAAGGACGGCCGCCTGATCCTGTCCAAGAAGCGGGCCCAGTACGAGCGGGCCTGGGGCACGATCGAGAAGAAGAAGGAGAACGACGAGATCGTCGAGGGGACGGTCATCGAGGTCGTCAAGGGCGGCCTGATCCTCGACATCGGTCTGCGCGGCTTCCTCCCCGCCTCCCTGGTCGAGATGCGCCGGGTGCGCGACCTGCACCCCTATGTCGGGCGCACCCTCGAGGCCAAGATCATCGAGCTCGACAAGAACCGCAACAACGTGGTCCTGTCGCGCCGGGCCTGGCTGGAGGAGACCCAGTCGGCCACCCGCCGGGCGTTCCTGCACACCCTGCGCAAGGGCGAGGTCCGCAAGGGCGTCGTCTCCAGCATCGTCAACTTCGGCGCCTTCGTGGACCTGGGCGGCGTCGACGGCCTGGTCCACGTGTCCGAGCTGTCCTGGAAGCACATCGACCATCCCTCCGAGGTGGTCGAGGTCGGTCAGGAGGTCGAGGTCGAGGTCCTGGACGTCGACCTGGAGCGCGAGCGGGTCTCGCTGTCGCTCAAGGCGACCCAGGAGGACCCGTGGCGCCAGTTCGCCCGCTCCCACCAGATCGGCGAGCTCATCCCGGGCCGGGTCACCAAGCTGGTGCCGTTCGGCGCCTTCGTCCGCGTCGACGACGGCATCGAGGGCCTGGTCCACATCTCGGAGCTGGCCGAGCGCCACGTCGACATCCCCGAGCAGGTCGTCAGCGTCGGCGAGGAGATCACCGTCAAGGTGATCGACATCGACCTGGACCGCCGCCGCATCTCCCTGTCGCTCAAGCAGGCCGCCCAGGACCAGGCGCAGCTCACCGCCCCGGAGGACGAGCTGGCCCTGGAGGAGGGCGCCTACCAGGGCTACGAGGGCGAGTACGCCGAGGGCCCCTATGTGGAGGGTGCCTACGCCGAGGGCGAGTACGCCGACGGCAGCTACGTCTACGACGAGCAGGGCAACCCCATCGGCGTGATGCCGGGCACGGCCATGGCCGAGGCGTTCCAGGAGGCCGGCTTCTACGAGGGCACCTACGATGCCGAGGGCGGCGAGGGCCAGCCGGCCGAGGGCCAGCCGGCCGAGAACCAGGCCGAGAACCAGGCTCAGGACGGCGAGGGCGAGGTCGCCCAGGAGGCCGAGGCCGGCGACACCGGCCAGGCGCAGGCGGCGGGCGACGACACGCTCGAGAACATCGTCGAGGACCTCAAGCGCAAGAACGCCGGCGAGTAG
PROTEIN sequence
Length: 520
LTESTERPTATEQDVPGVTTQVTQNDVGSAEDLAAAYEESLKAFEEGDIVDGYVVKVDRDEVLLDIGYKSEGVIPSRELSIKHDVDPNEVVSLGDHIEALVMQKEDKDGRLILSKKRAQYERAWGTIEKKKENDEIVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLHPYVGRTLEAKIIELDKNRNNVVLSRRAWLEETQSATRRAFLHTLRKGEVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVGQEVEVEVLDVDLERERVSLSLKATQEDPWRQFARSHQIGELIPGRVTKLVPFGAFVRVDDGIEGLVHISELAERHVDIPEQVVSVGEEITVKVIDIDLDRRRISLSLKQAAQDQAQLTAPEDELALEEGAYQGYEGEYAEGPYVEGAYAEGEYADGSYVYDEQGNPIGVMPGTAMAEAFQEAGFYEGTYDAEGGEGQPAEGQPAENQAENQAQDGEGEVAQEAEAGDTGQAQAAGDDTLENIVEDLKRKNAGE*