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PLM3_60_coex_sep16_scaffold_20059_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(2288..2995)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI0003601B28 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 229.0
  • Bit_score: 222
  • Evalue 3.70e-55
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 229.0
  • Bit_score: 219
  • Evalue 8.90e-55
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADH67075.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 229.0
  • Bit_score: 219
  • Evalue 4.40e-54

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Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGGGTGAGACCGAGCTGGCCTGGATCGGCGCCGAGCGCTCCCTCCCGGCCGCGCAATCGGCGGAGCTTCCGCTGCTGCTGGCGGCCAGCGCCTATCACCTTGGGCATGTCTTCCTCCGGGCTGGTCAGGTCGAGGAGGCCACCAGCGTCGCGATGACCGCAGCGCGGGCCTTAGAGCCCGGGCTGGCGACCGCCAATCCGGAGCACCTGTCGGCATGGGGCGCGCTGCATCTGACCGCGTTGATCGCAGTTGCTCGCCAAGACGACCGGGTCGCAGTGCGCCAGCTTCTCGGCGAGGCGTGGACCACGGCCGACCGACTCGGCCAGGAGCGCAACGACTTCTGGACCGCGTTCGGCCCCACCAACGTTGCGTTGCATGAGGTCTCGACGGCCGTTGAGCTTGGCGACCCGGGCGAGGTCGTGCGCAAGGGTGAGGCGCTCGACCCTGCGCGTTTCCCGCCGGGCCTGCTTGGCCGGCGCGCGCAGGTGTTCATCGACTTGGCGCGTGGGTACACCCAGCAGCGCAAGGACGCTGCCGCCGTGAACATGCTCCTGGAGGCCGAGCGGCTCGCGCCCGAGGCGGTCAGGTATCAGGTGATCGTCAAGGAGATGCTGCGCGAGCTGCTGAGGCGCGAACACCGGGCAAGTACGCCTCAGCTACGCCCGATGGCTGTCCGAGTCGGCATCCTTCGCGAGGACGCCTCCTAG
PROTEIN sequence
Length: 236
VGETELAWIGAERSLPAAQSAELPLLLAASAYHLGHVFLRAGQVEEATSVAMTAARALEPGLATANPEHLSAWGALHLTALIAVARQDDRVAVRQLLGEAWTTADRLGQERNDFWTAFGPTNVALHEVSTAVELGDPGEVVRKGEALDPARFPPGLLGRRAQVFIDLARGYTQQRKDAAAVNMLLEAERLAPEAVRYQVIVKEMLRELLRREHRASTPQLRPMAVRVGILREDAS*