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PLM3_60_coex_sep16_scaffold_31136_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: 1344..2483

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SE79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 384.0
  • Bit_score: 334
  • Evalue 1.10e-88
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82806.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 384.0
  • Bit_score: 334
  • Evalue 1.50e-88
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 302.0
  • Bit_score: 248
  • Evalue 2.20e-63

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Taxonomy

Aeromicrobium marinum → Aeromicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGACGCCCGACCTCGACCCGACGCGCGCGACGACGCCGAGCTCGTGCGGGCGGCGACGGCCGGCGACCGCGGCGCCTTCGCCGCGATCTACGACCGCTACGCCGACCGCCTGCACGACTTCTGCTGGTCGGTGCTGCGCGACCGGGACGAGGCGGCCGACGCCACCCAGGACGCGTTCCTGGTCGCGGCCGAGCGCCTCGGCCAGCTCCGCGACCCGGAGCGGCTGCGGCCGTGGCTGTACGCGGTGGCGCGCAGCCAGGCCCTCCGCCGGGTCCGGGCCCGATCGCGTGTCGCGCCCGAGGAGGAGATGACCGAGCTGCCCGACCCCGCCACCGGCCCCGAGCAGGCGGCCGAGCGCTCGGACCTGCGCGAGCTGGTCTGGAACGCCGCCGCCGGCCTGTCCGAGCGCGACCGGGCCCTGCTCGACCTCCACCTCCGCCACGGCCTCGAGGGCGCCGAGCTGGGCCAGGCCATGGGCATAGAGCCCGGCCACGCCTACGTCCTCCTCAGCCGCCTCCGCGACCAGGTCGAGCGCTCCCTCGGCGCCCTCCTGGTCGCCCGCCTGGGTCGCGACGACTGCCCCGCCCTGGCCGCCATCCTGTCCGGGTGGGACGGCCGCTTCACCCCCCTGATCCGCAAGCGGGTCGCCCGCCACGTCGACGCCTGCGACGTCTGCAGCGAACGCCGCCGCACCGCCGCCAGCCCCCTGGCCCTCCTGGCCGCCGTCCCCCCCATGCCAGCCCCCGCCTTCCTCCGCGACCGGGTCCTGGAGCGGGTGGAGCTCCTGGCGGGGTCGGGGTCCGGCGGCGACACCGGGGACGCCGGGGGTCCCGGCGGGGAGGGTTCTGGGGGTTCGGGGGGCGGGTCGCCGGTCGCGGCCGCTGTGGGCGCGCCCCAACCCGACCCTCCGGCGGCGGGGCCCCCGGAGGGGGAGAGTAGCCGACTCGCCGGTTCGGGTGGGTCCGGTATCCACAGCCCCCGGCGCCGCGGGGCGGTCGTGGCGCTCGTGGCCGCGCTGCTGCTGGCGGCCGGGGTCGGGGTCGGGTTGGGGTGGGAGCGGGCCCCGGCCTCCGGCCCCACGAACGGCCAGGGCGGCCCGATCGTGGCCGGGGCGGCCACCTCGGTGGCGCCCACCTCC
PROTEIN sequence
Length: 380
MDARPRPDARDDAELVRAATAGDRGAFAAIYDRYADRLHDFCWSVLRDRDEAADATQDAFLVAAERLGQLRDPERLRPWLYAVARSQALRRVRARSRVAPEEEMTELPDPATGPEQAAERSDLRELVWNAAAGLSERDRALLDLHLRHGLEGAELGQAMGIEPGHAYVLLSRLRDQVERSLGALLVARLGRDDCPALAAILSGWDGRFTPLIRKRVARHVDACDVCSERRRTAASPLALLAAVPPMPAPAFLRDRVLERVELLAGSGSGGDTGDAGGPGGEGSGGSGGGSPVAAAVGAPQPDPPAAGPPEGESSRLAGSGGSGIHSPRRRGAVVALVAALLLAAGVGVGLGWERAPASGPTNGQGGPIVAGAATSVAPTS