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PLM3_60_coex_sep16_scaffold_37312_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: 2911..3702

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C951D similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 261.0
  • Bit_score: 389
  • Evalue 1.50e-105
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:EXG81891.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 259.0
  • Bit_score: 364
  • Evalue 1.20e-97
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 259.0
  • Bit_score: 352
  • Evalue 9.80e-95

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACCCGGCGCATCAGCCGGGCCAAGCAGCGCATCAAGGAGAGCGGCGTGCCGTTCGCCATGCCCCCCGGCGGCGAGCGCGGCCAACGGCTCGGCGCCGTCCTCCACGTGCTCTACCTGGTCTTCAACGAGGGCTATACCAGCACCTCGGGGCCGAGCCTGCACCGCGGCGAGCTGTCGGCCGAGGCGATCCGGCTGGCCGGCATGGTCCACCGGCTGCTGCCCGGCGACGCCGAGGTGGCGGGGCTGCTGGCGCTCATGCTGCTCACCGACGCCCGCCGGCCGGCGCGGGCCGGGCCCGACGGCGGGCTGGTGCCCATGGCCGAGCAGGACCGGAGCCTCTGGGACGCGAGCAGGATCGCCGAGGGGGTGGCCCTCATCACCGAGGCCCTCCCCCGCGGGCCGACCGGCCCCTACCAGCTCCAGGCGGCGATCGCCGCCGTCCACGACGAGGCGCCGAGCGCCGAGGCGACCGACTGGCCACAGATCGTGGCGCTGTACGAGCTGCTGCGGCAGACCTCCGACAACCCCGTGGTGGCGCTGAACCACACCGTCGCGGTGGCCATGGCCCGGGGCCCGCACGAAGGGCTCGACCTGCTCGGGAAACTCGAGGCCGACGAGCGGATCGCCGACGACCACCGGCTCCACGCGGTCCGCGCGCACCTGCTGGAGATGGCCGGCGACCGCGCCGGCGCACGCGACGCCTACGAGGCGGCGGCCCGGCGGACCACCAACCTGCCCCAGCGGCGCTACCTCCACGGCCGGGCCGCCCGCCTGGCCGGCGGCGGCTAG
PROTEIN sequence
Length: 264
MTRRISRAKQRIKESGVPFAMPPGGERGQRLGAVLHVLYLVFNEGYTSTSGPSLHRGELSAEAIRLAGMVHRLLPGDAEVAGLLALMLLTDARRPARAGPDGGLVPMAEQDRSLWDASRIAEGVALITEALPRGPTGPYQLQAAIAAVHDEAPSAEATDWPQIVALYELLRQTSDNPVVALNHTVAVAMARGPHEGLDLLGKLEADERIADDHRLHAVRAHLLEMAGDRAGARDAYEAAARRTTNLPQRRYLHGRAARLAGGG*