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PLM3_60_coex_sep16_scaffold_124_32

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 38721..39233

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D3498 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 164.0
  • Bit_score: 149
  • Evalue 2.20e-33
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 164.0
  • Bit_score: 141
  • Evalue 1.10e-30
sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 164.0
  • Bit_score: 137
  • Evalue 2.40e-30

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Taxonomy

Streptomyces scabiei → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCGACCGGCGAGGGGTTCCACGACTTCTACCGTGACGCCTACCCGCGGCTGGTCGCCCAGCTGTACGCGGTCACAACCGACCTGGGGTTGGCCGAGGACGTCGTCCAGGAGGCGTTCGTGCGGGCCGCCAACCGCTGGTCGGAGGTCCGCACCTACCAGGCGCCGGAGGCGTGGGTCCGCAAGGTGGCGCTGCGGCTGCGGCTGGACGCCGCGCGCCGGCTCCGCCGTCAGGCGGCGGCCCTGACCCGGCTGGGCGCCCGCCCCGACCCGCAGCCGGCCCTGGACCCCGAGGACCGGGGGCTGGTGGAGGCGCTGGGGCGCCTGCCACGCCGCTACCGCGAGGTGCTGGTGCTGCACCACTGCCTGGACCGCTCGGTCCAGGACGTCGGCGCCCACCTGGGCGTCCCCACCGCCACCGTCAAGACCCGCCTGGCCAGGGGCCGGGCCATGCTCGCCGGCCTGCTGGAGGCGCCGGCCGGCCAACAGCAACAAGGAGCACCCCATGCCTAG
PROTEIN sequence
Length: 171
MATGEGFHDFYRDAYPRLVAQLYAVTTDLGLAEDVVQEAFVRAANRWSEVRTYQAPEAWVRKVALRLRLDAARRLRRQAAALTRLGARPDPQPALDPEDRGLVEALGRLPRRYREVLVLHHCLDRSVQDVGAHLGVPTATVKTRLARGRAMLAGLLEAPAGQQQQGAPHA*