ggKbase home page

PLM3_60_coex_sep16_scaffold_902_16

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(12916..13512)

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV pilus assembly protein PilW Tax=Candidatus Nitrospira defluvii RepID=D8P8D1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 80.0
  • Bit_score: 62
  • Evalue 4.10e-07
putative type IV pilus assembly protein PilW similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 80.0
  • Bit_score: 62
  • Evalue 1.20e-07
Putative Type IV pilus assembly protein PilW {ECO:0000313|EMBL:CBK43763.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 80.0
  • Bit_score: 62
  • Evalue 5.80e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 597
ATGGGCACCTCACAGCGCCGGGACGGCAGCGAGGCCGGGTTCACCATCGTCGAACTGATGGTGACCTCGGCGATCTTGCTGCTGATCGTCAGCGCGACCATGGCGGTGCTGGTCGCCGGCCAGCGGGCGACCGCCTTCTCGGGCCGGCGGGGCCAGACCCAGGACGACGTGCGGCTCGCCATGGACCGGCTCACCAAGGACCTGCGCCAGGTCACCCGCTTCAACACCACCTTCCCGGCCTCCGGCTCCTGGACCGGCCACGACCTCGACTTCCTGACCTACACGCCGGTCAACCCCGACGTCCCGGTCCGCGTGCGCTGGTGGGTGTCGGGGACGACCCTGAGCCGGCAGGAGTGGCGGCCCGACGGCACCAGCGCCGGCACGCTCGCCCTGCTCCAGGCGGTCACCCCGCCCGGGGCCGGCGTGCCCGACCTGTTCTCCTGCGACGTGCTGCAGGGCTCCGACGCCGTCACCGGCACCCCGGTGCCGTGGCAGATCACCGTCACGGTCACGGTCGACCTGGTCGACCCCGGCGCGACGTACTCGACCCAGACCCAGGTGCAACTCCGCAACCTGCAGATCCCGCAGCCGGCATGA
PROTEIN sequence
Length: 199
MGTSQRRDGSEAGFTIVELMVTSAILLLIVSATMAVLVAGQRATAFSGRRGQTQDDVRLAMDRLTKDLRQVTRFNTTFPASGSWTGHDLDFLTYTPVNPDVPVRVRWWVSGTTLSRQEWRPDGTSAGTLALLQAVTPPGAGVPDLFSCDVLQGSDAVTGTPVPWQITVTVTVDLVDPGATYSTQTQVQLRNLQIPQPA*