ggKbase home page

PLM3_60_coex_sep16_scaffold_1024_21

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(15639..15887)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB Tax=Frankia RepID=I9KNA4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 135
  • Evalue 1.60e-29
WhiB family cell cycle control transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 135
  • Evalue 4.50e-30
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 135
  • Evalue 2.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGATTGGCGCCATCGTGCCCGCTGCCGCGATGTCGACCCCGAGCTCTTCTTCCCGGTCGGCACCACCGGGCCGGCCGAGGCTCAGGTCCAGGCGGCCAAGGCCATCTGCGCGCTGTGCCCCGTTCGTGAGGAGTGCCTCCAGTGGGCGCTGGACACGGCCCAGGACGCGGGCGTCTGGGGCGGGTTGTCCGAAGAGGAGCGACGCGCTCTCCGGCGCGGGCAGCGCCGCAGGGTCCGGATCGCCTGA
PROTEIN sequence
Length: 83
MDWRHRARCRDVDPELFFPVGTTGPAEAQVQAAKAICALCPVREECLQWALDTAQDAGVWGGLSEEERRALRRGQRRRVRIA*