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PLM3_60_coex_sep16_scaffold_984_14

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 12195..12638

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8LH39_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 165
  • Evalue 2.60e-38
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 165
  • Evalue 7.30e-39
Integrase catalytic region {ECO:0000313|EMBL:ABW12810.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 165
  • Evalue 3.60e-38

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 444
GTGAGACTGCGGTCCGATGTGATCGTGCTGGCGGTCCGCTGGTACCTGCGCTTCGGCCTGTCCTTTCGCGACGTCGAGGAGCTCCTCACCGAGCGGGGTGTCGAGGTGGACCACGTGACGGTCTACCGGTGGGTGCTACGGTTCACACCGCTGCTGGCTGAGGCCGCCCGACCCTGCCGGCACGTCGTCGGCGACCGTTGGTTCGTGGACGAGACCTATGTGAAGGTGGCTGGGCACTGGCGCTCCGTCTACCGCGCCATCGACCAGTTCGGGCAGGCCATCGACGTGTTCGTCTCCGCGTCGGGACGCCGAGGCCGCCCGGCGGTTCTTCCAGCAAGCCATCGGTGCGACCAAGATCACACCCGTCGAGGTCACCATCGATCAGGCGCCGGTCTACCCAGTTGTACTGGAGGAGCTGCTGCCAGCGGCATGGCATCGCACTGA
PROTEIN sequence
Length: 148
VRLRSDVIVLAVRWYLRFGLSFRDVEELLTERGVEVDHVTVYRWVLRFTPLLAEAARPCRHVVGDRWFVDETYVKVAGHWRSVYRAIDQFGQAIDVFVSASGRRGRPAVLPASHRCDQDHTRRGHHRSGAGLPSCTGGAAASGMASH*