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PLM3_60_coex_sep16_scaffold_1408_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(230..1273)

Top 3 Functional Annotations

Value Algorithm Source
small conductance mechanosensitive ion channel (MscS) family protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 334
  • Evalue 7.50e-89
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 341.0
  • Bit_score: 323
  • Evalue 3.80e-86
Tax=RBG_13_Planctomycetes_46_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 340.0
  • Bit_score: 330
  • Evalue 1.50e-87

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Taxonomy

RBG_13_Planctomycetes_46_10_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1044
ATGGACTGGATCAGCGGTGCCGGCCTGCCCCGGGCGCTCACCACGGTCGGCGTGGTCCTGGCCGCGCTGCTCATCCACATCGCGATCTGGCGCCTGGTCCTGCGGGTCATGCGGGACCGCATCCTGGCGGCGGACCTGAGCATCCACTGCCGCTGGCCGGCGCGAGCGGTGGTGGCGCTGGCTGCCCTGCTGCTGGCCCTCCCCACCGCGCGCCTGCCGTCCAGGCCGCACGGGACGGTGGTCCAGGTGCTGCTGCTGCTGCTCGTCGCCGCCGTCGCCTGGCTGGCGGTGTGTGTGGTGCGCGTGGCCGAGGACGCGCTCATGCGGCGCTACGACGTGGACGTGCCCGACAACCTGCGCGCCAGGCGGGCGCGCACCCAGGTCCAGGTGCTCGGCCGGGTCGTGAAGGTTGCGGTCGTGGTGCTGGCGGTCGCCATCATGCTGCTGACCCTCCCGCAGGGACGGGCGGTCGGGACCAGCCTGCTCGCCTCTGCCGGGATCGCCGGCGTCATCGCCGGGATCGCGGCCCGCTCCACCGTCGGCAACCTCATCGCGGGCCTGCAGATCGCGTTCGCCGAGCCCATCCGGCTCGACGACGCGGTGGTCGTGGAGGGCGAGTGGGGCAATATCGAGGAGATCACCCTCACCTACGTGGTGGTGCGGATCTGGGACCAGCGCCGGCTGGTGTTGCCGTGCAGCTACTTCGTCGAGCGCCCGATCCAGAACTGGACGCGCTACTCGTCCGACATCGTCGGCAGCGTCCACCTGCACGTCGACTACGCGACCCCGGTCGAGGAGGTCCGCGCCGAGTTCGAGCGGGTGCTTGCCGCATCCAAGCTGTGGAACGGGCAGACGGCCGTGCTGCAGGTCGTCGACACCACCGAGCAGACCATGGTGCTGCGCGCCCTGGCGAGCGCCGACAGCGCGCCGAGCCTTTGGGACCTGCGCTGCGAGGTCCGCGAGCGGCTGCTGGCGTGGCTGCAGCGCGAGCACCCGGAGGCGTTGCCGCGAGTGCGCGCCGAGCTGGAGGAACGCGGGAGCTGA
PROTEIN sequence
Length: 348
MDWISGAGLPRALTTVGVVLAALLIHIAIWRLVLRVMRDRILAADLSIHCRWPARAVVALAALLLALPTARLPSRPHGTVVQVLLLLLVAAVAWLAVCVVRVAEDALMRRYDVDVPDNLRARRARTQVQVLGRVVKVAVVVLAVAIMLLTLPQGRAVGTSLLASAGIAGVIAGIAARSTVGNLIAGLQIAFAEPIRLDDAVVVEGEWGNIEEITLTYVVVRIWDQRRLVLPCSYFVERPIQNWTRYSSDIVGSVHLHVDYATPVEEVRAEFERVLAASKLWNGQTAVLQVVDTTEQTMVLRALASADSAPSLWDLRCEVRERLLAWLQREHPEALPRVRAELEERGS*