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PLM3_60_coex_sep16_scaffold_2135_8

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(10092..11177)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI0003601B28 similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 314.0
  • Bit_score: 266
  • Evalue 2.60e-68
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 317.0
  • Bit_score: 261
  • Evalue 1.80e-67
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADH67075.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 317.0
  • Bit_score: 261
  • Evalue 9.10e-67

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Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
CCGAGACGCCACCGGAGACACCTCCGTGGGGACCTGCGTGTTGGCAACCGCAATGTCCCCATTGTGGCGTCTCTTCTATTCAGCCTTCCGCCCGGTCACCGCGTAACTCCTGTCACTGACTACGAGGTGATCCCCGCGGCATTCGGCGTCGCCATAGGCGATGGCCCGGTCCGGGAGCTGGCGAGCCTGCGGCGCAACGTCGACCAGGCAAACCGTCTCTACCAGGCGGCCCACTACGAAGAGGCGGGCCTGCTGTGTTCCCGGCTCATCGGCGACGCCCAGCGCGCAGCGCGCGAGCTGACCGGCGACGACCGGCGCGGCGCCTTTGGTGTCCTGGCGGAGAGCTACCACATCACCGCGAAGATCCTGACCAAGGTGGGCGAGACCGAACTGGCCTGGATCGCTGCCGAGCGTTCCCTCCCGGCCGCTCAATGGGCGGAGCTCCCCCTGCTGCTGGCGGCCAGCGCCTACCACCTTGGGCACGTCTTTCTCCGGGCCGGGCAGGTCGAGCAGGCCACCGGCGTCGCGATGACCGCAGCGCGAGCCCTGGAGCCCGGCCTGGCGACCGCCGCCACCCCGGAGCACCTGTCGGCATGGGGCGCACTCCACCTGACCGCGTTGATCGCCGCTGCCCGCCAGGACGACCAGGTCGCGGTGCGCCAGCTCCTCGGCGAGGCGAGGGCCACCGCCGACCGGCTCGGCCAGGACCGCAACGACTTCTGGACCGCGTTCGGTCCCACCAACGTCGCGCTGCACGAGGTCTCGACAGCGGTTGAGCTTGGCGATGCCGGGGAGGTTGTGCGCAAGGGCGAGGCGCTCGACCCCTCGCGCTTCTCGCCGGGCCTGCTTGGTCGGCGCGCGCAGGTATTCATCGACCTGGCGCGCGGCTACACGCAGCAGCGCAAGGACGCGGCCGCGGTGAACATGCTCCTGGAGGCCGAGCGGATCGCGCCCGAGGCGGTCAGGTACCAGGTGATCGTCAAGGAGATGCTGCGCGAACTGCTCAGGCGCGAGCACCGCACGAGCACGCCGCAGTTGCGTCCGCTCGCGGCCCGGGTCGGCATCATCCGCGAGGACGCGTCGTAG
PROTEIN sequence
Length: 362
PRRHRRHLRGDLRVGNRNVPIVASLLFSLPPGHRVTPVTDYEVIPAAFGVAIGDGPVRELASLRRNVDQANRLYQAAHYEEAGLLCSRLIGDAQRAARELTGDDRRGAFGVLAESYHITAKILTKVGETELAWIAAERSLPAAQWAELPLLLAASAYHLGHVFLRAGQVEQATGVAMTAARALEPGLATAATPEHLSAWGALHLTALIAAARQDDQVAVRQLLGEARATADRLGQDRNDFWTAFGPTNVALHEVSTAVELGDAGEVVRKGEALDPSRFSPGLLGRRAQVFIDLARGYTQQRKDAAAVNMLLEAERIAPEAVRYQVIVKEMLRELLRREHRTSTPQLRPLAARVGIIREDAS*