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PLM3_60_coex_sep16_scaffold_3645_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 7778..8275

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor Tax=Streptomyces griseoflavus Tu4000 RepID=D9XKZ8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 146
  • Evalue 2.40e-32
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EFL39144.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 146
  • Evalue 3.30e-32
sig39; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 163.0
  • Bit_score: 136
  • Evalue 4.10e-30

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Taxonomy

Streptomyces griseoflavus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGCCGACCACGACTTCGACGAGTTCTACGCCAGCAACTACGGCCGCTTCGTCGTCCAGCTCTACGCCGTCACCGGCAGCCTGCCGGACGCCGAGGACGCGGTGCAGGAGGCGTTCGCCCGCGCCTCGGTCCACTGGGGCCGCGTCAGCGCCTACGAGATGCCGGAGGCGTGGGTCCGCCGGGTGGCGCTCAACGTGGCGTTCACGGGACTGCGCCGGGCGCGGCGGGTCCTGGAGGTGCTGACCCGCGCCGAGCCGCCGCCGGCGGCGCCGCTCCCCGGCGCCAGCGTGGAGCTGGTGGAGGCGCTCGGGAGGCTGCCGCTCCACTTCCGTCAGGTGCTGGTCCTGCACTACCTGGCCGACCTGCCGGTCGAGCGCGTCGCCGGCGAGCTCGGGATCGCGGTCGGGACCGCCAAGTCGCGACTGGCCCGGGCCAGGGAGGCGCTCGCCAGGCAGCTCGTCGACGGCGGGGAAGAGGTGGGAAGTGCGCAGCGATGA
PROTEIN sequence
Length: 166
MADHDFDEFYASNYGRFVVQLYAVTGSLPDAEDAVQEAFARASVHWGRVSAYEMPEAWVRRVALNVAFTGLRRARRVLEVLTRAEPPPAAPLPGASVELVEALGRLPLHFRQVLVLHYLADLPVERVAGELGIAVGTAKSRLARAREALARQLVDGGEEVGSAQR*