ggKbase home page

PLM3_60_coex_sep16_scaffold_4915_14

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 15958..16632

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 129
  • Evalue 3.30e-27
2'-5' RNA ligase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGJ3_ANASK similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 129
  • Evalue 2.40e-27
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 194.0
  • Bit_score: 129
  • Evalue 6.70e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaeromyxobacter sp. K → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACCCGCCCCGGCGCCGGTCCGCCCGCCGGCCGGGGACCGCGCCGGCCCGGTCGCGGCACCCCGGGTCGCGGGGCCGAGGCGAGCCTCGCCGACCCGGACCTGCTGGCTGGCCGGCTCTTCTTCGCGGTGCCGGTGCCGGGCGTGAGCCGGGCGCCGCTGGAGGCGGCCCTGCCCGACCTGGCGCCGCTGCTGGCCGGCGCGCGCCTGACCGCCCCGGGAGGCTGGCACCTCACGCTTGCGTTCCTCGGCCAGGTCCAGCCCGAGCTGGCCGACGCGGTCGTGCGGGTCGGCGAGGCGGCCGCCGCCGGGGCCCCCGCCGCCCGGCTGCGACTGGAGGGGTCGGGCGCCTTCCCCAACGGGCGCCGCGCCCGGGTCCTGTGGGCCGGGCTCGGCGGCGACACCGACGTGCTGGTGCGGCTGGCCGCCAGCCTCGCCGCCGAGTGCAAGGCGGCCGGCCTGCGGTTCGAGGAGCGGCCGCTGGTGCCCCACCTGACCCTGGCGCGCTTCTCGACGCCCGCGCCCGTGCCGGAGGCGGCCCTGGAGCTGGTCGCCGGCGCCGCCGCGGCCGGCTCGGAATGGGAGGCGCGTGAGCTGGCTTGCTATCGCAGCATCCTCGGCGGCGCCCGCGGCGCCCGCTACCGGGTGGTCCGCGAGTTCCCCCTGGCCGGGTAG
PROTEIN sequence
Length: 225
MTRPGAGPPAGRGPRRPGRGTPGRGAEASLADPDLLAGRLFFAVPVPGVSRAPLEAALPDLAPLLAGARLTAPGGWHLTLAFLGQVQPELADAVVRVGEAAAAGAPAARLRLEGSGAFPNGRRARVLWAGLGGDTDVLVRLAASLAAECKAAGLRFEERPLVPHLTLARFSTPAPVPEAALELVAGAAAAGSEWEARELACYRSILGGARGARYRVVREFPLAG*