ggKbase home page

PLM3_60_coex_sep16_scaffold_5098_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2..238)

Top 3 Functional Annotations

Value Algorithm Source
Rrf2 family transcriptional regulator Tax=Nocardiopsis alkaliphila RepID=UPI00036D6A40 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 69.0
  • Bit_score: 101
  • Evalue 3.20e-19
BadM/Rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 98
  • Evalue 5.90e-19
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AAZ54838.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 98
  • Evalue 2.90e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGCCCGCGGTTTCGGCGAGAATGCGGGCATGCATGTCTCAGCCAAGGCGGATTACGCGGTGCGGGCGGCGGCCGAGCTGGCCGCGGCCGGCGACGGGCCGGTCAAGGGCGACCGGATCGCCGAGGCGCAGGGCATCCCGCTGAAGTTCCTCGAGAACATCCTGTCCGAGCTGCGCCACGCCGGCATCGTGCAGAGCCAGCGGGGCGCGGAGGGCGGCTACTGGCTGGCCCGCCCG
PROTEIN sequence
Length: 79
MARGFGENAGMHVSAKADYAVRAAAELAAAGDGPVKGDRIAEAQGIPLKFLENILSELRHAGIVQSQRGAEGGYWLARP