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PLM3_60_coex_sep16_scaffold_6206_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 1474..2574

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 325.0
  • Bit_score: 281
  • Evalue 1.10e-72
Pseudouridine synthase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SA38_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 325.0
  • Bit_score: 281
  • Evalue 8.00e-73
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 325.0
  • Bit_score: 281
  • Evalue 2.30e-73

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
GTGACCCCCCCGGACGACCCCGCCCCGGCGTCCCCCGGCCGCGGCGACACGGCAGGCGACCCCTCCGGCCGATCCACCGGGACACCCCCTCGGGACCCCTCTGACCGGGGGACCCCCTCGGGGTCTCCCGGGCCCCTCCGCCCGGACCCCTCCGGCGCGGCGGGTGAGGTGGTCGTCGGGGCGGCGGACGCCGGGCGGCGGCTGGACGAGGTGGCGGCGGAGGCGGCCGGGGTGTCGCGGGCACGGGCGGCCCGCTGGGCCGGGGAGGGGCTGGTGCTGGTCGACGGCCGCACGCGGCCGAAGTCGCACCGGCTGGTCGGCGGCGAGCGGCTGGCCTGGACCCCGCCGCCGCCGCCGTCGGGGGGCGGCTGGCCGGCCGCCGAGGACCTGCCCCTGGAGGTCCGCTACGAGGACGACCGGCTGCTGGTGGTGGCCAAGCCGGCCGGCCTGGTCGTCCACCCCGGGCCCGGCCACCCGACCGGGACCCTGGTCAACGCCCTGCTCGGCCGGGCAGGGACCGTCCTGGCAGCCGGCGGCGAGGCCCACCGGCCGGGGATCGTCCACCGCCTGGACAAGGACACCTCAGGGCTGCTGCTGGTCGCCAAGGACGACGCCGCCCACCTCGCGCTCTCCCGCGACCTGGCCGCCCACCAGGTCGAACGCCGCTACCTGGCGCTGGTGCAGGGCCGGCTGCCCAGCGCCGACGGCACCGTCGACCGGCCGGTCGGCCGCCATCCCCGCGACCGCAAGCGGATGGCCGTGGTCGCCAAGGGCGGCCGCGCCGCCGTCACCCACTGGCGGGTGCTGGAGACGTTCCCCGCCGTGCAGCTCGTCGAGGCGACCCTGGAGACCGGCCGCACCCACCAGGTCCGCGTCCACCTGGCCGCCGTCCGCCACCCGCTGGTCGGCGACCGGACCTACGGCGCCGACCCGAGCCTGGCCGCCCGCCTCGGCGTGGACCGCCCTTTCCTGCACGCCTGGCGCCTCGCCTTCCGCCACCCCGCGGACGGCCACACGGTCGAGCTCACCGAGCCCCTCCCGCCCGACCTGCAGGGGGTGCTCGAGCGGCTCGGCGCGAGCTGGCGGGCAACCTCTTCCTGA
PROTEIN sequence
Length: 367
VTPPDDPAPASPGRGDTAGDPSGRSTGTPPRDPSDRGTPSGSPGPLRPDPSGAAGEVVVGAADAGRRLDEVAAEAAGVSRARAARWAGEGLVLVDGRTRPKSHRLVGGERLAWTPPPPPSGGGWPAAEDLPLEVRYEDDRLLVVAKPAGLVVHPGPGHPTGTLVNALLGRAGTVLAAGGEAHRPGIVHRLDKDTSGLLLVAKDDAAHLALSRDLAAHQVERRYLALVQGRLPSADGTVDRPVGRHPRDRKRMAVVAKGGRAAVTHWRVLETFPAVQLVEATLETGRTHQVRVHLAAVRHPLVGDRTYGADPSLAARLGVDRPFLHAWRLAFRHPADGHTVELTEPLPPDLQGVLERLGASWRATSS*