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PLM3_60_coex_sep16_scaffold_7917_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(4653..7151)

Top 3 Functional Annotations

Value Algorithm Source
ligD; DNA ligase D (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 855.0
  • Bit_score: 475
  • Evalue 2.40e-131
ATP-dependent DNA ligase Tax=Mycobacterium avium RepID=UPI0002DF59BC similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 826.0
  • Bit_score: 499
  • Evalue 4.20e-138
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 838.0
  • Bit_score: 806
  • Evalue 3.00e-230

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2499
ATGGCCACCGGCAAGCGCCGCCGCCTGCCGTTCCCGACGCCGCTGCCCGCCAGGCGGGCCGGCGAGGCGTGGCTGCTCGAGGCCGCCGGCCGCGAGCTGCGCCTCTCCAACCTGAACAAGCTGTACTGGCCGGACGACGGCATCACCAAGGGCGACCTGCTCGCCTACTACTGGAACGTCGCCGAGCTGGTCCTGCCCCACCTGCGCGACCGGCCACTGACCATGCGGCGCATGCCCGACGGGCTGGCCGGGCAGCCGTTCTACGAGAAGCAGGTGCCCGCCCACGCGCCCGACTGGCTGCCCACCGCGGCGGTGGTCGAGTTCGTGGTCGTGCAGGACCTGGCCAGCCTGCTGTACGTGGTCAACCTCGGCTGCATCGAGATGCACCCGCTGCACGCCAGGGCCGGCTCGCTGGACCGGCCCGACTACGCCTTCTTCGACCTCGACCCGTTCGAGCCGTACACCTACGAGGACGTCCGAACCGTCGCCAAGCTGGTCAAGGTGGTCCTGGACGGCCTCGGGCTGCGCGGCTACCCCAAGACGTCGGGAGCCACCGGCATGCAGGTGTTCGTGCCGCTGGACGGGACCCACACCCACGCCGACGCCCGCGAGCTGGTTGAGCGGGTCGGCCGGCTGGTCGTCCGCGCGTACCCGGAGAAGGCCACCATGGCGTGGCCGCTGGCCGAGCGGGCCGGCAAGGTCTTCATCGACCATCAGATGAACCGCCCGGGGGCCAACATCGCCAGCGCCTACTCGCTGCGGCCGCTGCCCAGGGCGCCGGTTTCGACCCCGCTCGACTGGGAGGAGCTGGACGAGGACCTGGAGCCGGTCGACTTCCGCATCGACAACGTCTGGGAGCGGTTCGCGGCCGGGGACCGGTTCGCGCCGGTCCAGACCGACAAGCAGTCGCTGGCCGGGGCGATGGAGGCCCTCGGGCTCACCCCCGCCGCCACCGCCGGGCCTGGCCATCGGGGCCGTCCCCGATTCCCCCGGAGCCGCGCCGACCGGCCGGCGAGCCGGGCGGTCCTGGACGAGTACGCGGCCAAGCGGGACTTCGGCCGCACCCCCGAGCCCTCCGGCGGGGACGCGGCGGCTCCCGAGGAACCGGAGGCGCACCCGGCCGGGCTCGTCGAGGTGGCCCCCCTGGAGCCGGGGCGCCGGTTCACCATCCAGCAGCACCACGCCCGGCGGCTCCACCACGACGTGCGCTTCGAGCGCGACGGCGTGCTGGTCTCCTTCGCGGTGCCCAAGCGCCTGCCCGAGGAGCCGGGCGTCCGCCACCTGGCCGTCAACACCGAGGACCATCCGCTCGACTACCTGACCTTCAGCGGCACCATCCCGGCCGGGGAGTACGGCGGCGGCGAGGTCCGCCTGTTCGACCTCGGCACCTACGAGCCGCTGGAGGTGGCCGACGGCAAGCTGACCGTCCGCCTCCACGGCAGCCGCTACCACGGGGCCGAGTTCCACTTCTTCCGCACCAGGGACCGCGACTGGCTGGTGATCCTCGGCGGCAAGGTGTCGCTCCCCCAGCCCAGCCCGCCGCCCACCTACCAGCCGATGATGGCCTCGCTCACCGCCGAGCCGTTCGACGACGACGGCTGGCTGTTCGAGGTCAAGTGGGACGGCCACCGCTGCCTCGCCAACCTCGGCCGGGCGACCCGGCTCACCTCCCGGACCGCCCGCGACATGACCGGCCAGTTCCCCGAGCTGATCGACCTGCACCGCCAGCTCGCCGCCCGCAACGCCGTGGTCGACGGCGAGATCGTGGCGCTGGACCGCGACGGCCGGCCCTCCTTCGAGCGCATGCAGGACCGCTTCCACCGCGCCCCCGAGGAGCTGGCCCGCAACCAGGGCCGGGTGCCGGTCCAGTTCATCGCCTTCGACCTGCTGTGGCTGGACGGCGAGCCGCTGCTGGACCTGCCGCTGACCGAGCGCCGTGCGCGGCTGGTCGAGGTGCTGGTCGAGACCCGGGACGTGCGGCTGTCGCAGGTGGTCCACGGCCGCGGCGTCGACTTCTTCGAGCAGGCGAGAGGGCTGGGCCTGGAGGGGGTGGTGGCCAAGCGGGCGGCCAGCCCCTACCGGCCAGGCACCCGCTCGCACGACTGGCGCAAGATCAAGGCGCTGCGCCGGCAGGACTGCGTGATCGTCGGCTGGACGCCCGGCCAGGGCCAGCGCGGCGCCACCCTCGGCTCGCTGCTCCTGGCGGTCAGCGACGGCCGGAAGCTGCGCTATGCCGGCAACGTCGGCACCGGCTTCACCCAGGCCTTCCTGGCCGACCTGCTCCCCGCCCTGGTCGAGCGCGAGGTCGCCGAGCCGCGGTTCGAGGGCGCCCCGCGGCTGCGCGGAGCCCGGTTCGTCCGCCCCGAGCTGGTCTGCGAGGTCGAGTACCTCAAGTGGACCGACGATGGCAAGCTGCGGGCCGCTTCCTTCAAGGGGCTGCGGCCGGACAAGCCCCCCAGCGACTGCGTGCGCGAGGACCCGGTCGACCTCCCCCGCTAG
PROTEIN sequence
Length: 833
MATGKRRRLPFPTPLPARRAGEAWLLEAAGRELRLSNLNKLYWPDDGITKGDLLAYYWNVAELVLPHLRDRPLTMRRMPDGLAGQPFYEKQVPAHAPDWLPTAAVVEFVVVQDLASLLYVVNLGCIEMHPLHARAGSLDRPDYAFFDLDPFEPYTYEDVRTVAKLVKVVLDGLGLRGYPKTSGATGMQVFVPLDGTHTHADARELVERVGRLVVRAYPEKATMAWPLAERAGKVFIDHQMNRPGANIASAYSLRPLPRAPVSTPLDWEELDEDLEPVDFRIDNVWERFAAGDRFAPVQTDKQSLAGAMEALGLTPAATAGPGHRGRPRFPRSRADRPASRAVLDEYAAKRDFGRTPEPSGGDAAAPEEPEAHPAGLVEVAPLEPGRRFTIQQHHARRLHHDVRFERDGVLVSFAVPKRLPEEPGVRHLAVNTEDHPLDYLTFSGTIPAGEYGGGEVRLFDLGTYEPLEVADGKLTVRLHGSRYHGAEFHFFRTRDRDWLVILGGKVSLPQPSPPPTYQPMMASLTAEPFDDDGWLFEVKWDGHRCLANLGRATRLTSRTARDMTGQFPELIDLHRQLAARNAVVDGEIVALDRDGRPSFERMQDRFHRAPEELARNQGRVPVQFIAFDLLWLDGEPLLDLPLTERRARLVEVLVETRDVRLSQVVHGRGVDFFEQARGLGLEGVVAKRAASPYRPGTRSHDWRKIKALRRQDCVIVGWTPGQGQRGATLGSLLLAVSDGRKLRYAGNVGTGFTQAFLADLLPALVEREVAEPRFEGAPRLRGARFVRPELVCEVEYLKWTDDGKLRAASFKGLRPDKPPSDCVREDPVDLPR*