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PLM3_60_coex_sep16_scaffold_9364_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 2753..4198

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PE87_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 302.0
  • Bit_score: 218
  • Evalue 1.40e-53
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 302.0
  • Bit_score: 215
  • Evalue 2.00e-53
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABW13381.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 302.0
  • Bit_score: 215
  • Evalue 9.90e-53

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
GTGTTGCTGGTGCGCGTCGCCGGCGGCGACCCGGCCGCGCTGGCGACCCTCTACCGGCGATACGGGGGCAGGTTGTTCGGCTACCTGCAGCGCTACGCGGGCGACCGGATGGTGGCCGAGGAGATCCTGCAGGACACCCTGCTGGCGGTGTGGCGCTCGGCCCCGCGGTATGCGGGGCGCTCCGGCGTGCGGACCTGGCTGTTCGGGATCGCGCGCCGGCAGGCGCACAACCGGCTGCGGGTCCAGGAGCCGCGGACGCTGCCCCTTGACGGCCTCGCCGGCTGGGCCGACCCGGGTCCCGGGCCGGCCGAGTGGGCCATCGCCAACGCGCAGGCCGCGGCGGTCGCCGACGCGTTCGCCGCGCTCGCCCCCGCAGCACCGCGAGGTGCTGGCGCTGGCGTTCGCGGCCCGGGTGCCGCATGGGGAGATCGCGGAGGTCCTGGGCGTACCGGTGGGGACGGTGAAGAGCCGGCTGCACCATGCCCGCGCGGCGCTGGCGCGCTCGCTGGCCGAGCGCGGGGTTGTCGAGGAGATGCCATGACTGGGGACGGCAAGCGGCACCCTACCGACGCGCTCGCCGAGTACGCCGCCGGCGTGTTGGACGCGCCGGCGCGGACGGCGGTCGAGGCCCACCTGATCGCCTGCCCCTCGTGCCGCACGGCCCTGCTGGGCTGGACGGCCGTGGCCGCGGCGACCGTGGCACCGGTGGCCGCGCCGCCGAGCTCGGCGTCGGTGGTTGGGGCGGTGCTGACCCGGGCGGCGCTCGCCCCGCAGGCCCCGCCGGTCCGCAAGCGGGGCGTCGGGTTCGCCGGGCAGTTGCTGCGCGCGGAGCTGCGGCTGGTGCGCCCGTCGGTATGGGTGGCCTCGATGCTGGTGATGGCGTGTGCGGTGGCAGCGGCCGCGGTGGCTGGCCACGGCGCGGGCGCCACCGCGCTGTCGCTGGTCGCGCCGCTGGTCGCGGTCGCCGGTGTCGCCGGGGTGTACGGGCCGCAGCGGGACCCGGCGTTCGAGGCGCTGGCGATCACGCCGACGTCGCCGCGGCTGGTGCTGCTGGCCCGGGTCACGCTGGTCTTCGGCTACGACCTGGCCCTGGCCGTGGCGGCGTCGGCGGTGGTGCAGCTCGTCGCCTCGGAGGTGGGGCTGGCCGAGCTGGTCGTCGCGTGGCTGGGACCGATGACGCTGCTGTCGGCGCTGAGCCTGGTGCTGGCGATGTGGATCGGCCCGAACGTGTCGCTGGGGGTGGCCGCCGCGCTGTGGGCGTTGCGGCTGGCAACGCTCGGCGTCCCGGAGCTGTCGGACGGGTGGCTGGCCGCCAGGATGCGGGAGGTCTGGGTCACCAGCCCGGGGACCGTCGCGGTGACGCTGGCGCTGCTGGTGGCGGCCGTGGCGCTCAGCCGGCGTCCCGGCCGGCCGCGGAGCGGGTGGTCCCGTCCGGTCGCGTGGTGA
PROTEIN sequence
Length: 482
VLLVRVAGGDPAALATLYRRYGGRLFGYLQRYAGDRMVAEEILQDTLLAVWRSAPRYAGRSGVRTWLFGIARRQAHNRLRVQEPRTLPLDGLAGWADPGPGPAEWAIANAQAAAVADAFAALAPAAPRGAGAGVRGPGAAWGDRGGPGRTGGDGEEPAAPCPRGAGALAGRARGCRGDAMTGDGKRHPTDALAEYAAGVLDAPARTAVEAHLIACPSCRTALLGWTAVAAATVAPVAAPPSSASVVGAVLTRAALAPQAPPVRKRGVGFAGQLLRAELRLVRPSVWVASMLVMACAVAAAAVAGHGAGATALSLVAPLVAVAGVAGVYGPQRDPAFEALAITPTSPRLVLLARVTLVFGYDLALAVAASAVVQLVASEVGLAELVVAWLGPMTLLSALSLVLAMWIGPNVSLGVAAALWALRLATLGVPELSDGWLAARMREVWVTSPGTVAVTLALLVAAVALSRRPGRPRSGWSRPVAW*