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PLM3_60_coex_sep16_scaffold_9938_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 2860..4428

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 513.0
  • Bit_score: 648
  • Evalue 6.50e-183
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003797AC1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 519.0
  • Bit_score: 657
  • Evalue 5.80e-186
ATP-dependent DNA ligase I similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 513.0
  • Bit_score: 648
  • Evalue 1.30e-183

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGGGCGCCGTGCTGCTCGAGGAGATCGCCGAGACGTCCGCCGCCGTCGCCGCCAGCTCCGCCCGCCTGGCCAAGGTGGAGCGCCTGGCCGCCTGCCTGCGCCGGCTCGACCCGGACGAGGTCCACCCGGCGGTCGCGTTCCTCTCCGGCGAGCTGCGGCAGCGCCAGATCGGCGTCGGCTGGGCGGCGCTCCGCGAGGTCCCCCCGCCGGCCGCCTTGCCGTCGCTGACCGTCGCCGAGGTCGACGCCGGCTTCGAGCGGATCGGGCGCCAGGCCGGGCCGGGGTCGCAGGCGGAACGGCGGCGCCTGCTGACCGGCCTGCTCAGCCGGGCGACCGGCGACGAGCAGCGGTTCCTGGTCCGGCTGCTCGGCGGCGAGCTGCGCCAGGGCGCCCTGGAGGGCGTGATGGTCGAGGCGACCGCCCGCGCCGCCGGGATCCCCGGCGCCGAGGTTCGGCGCGCCCTGATGCTGCGCGGCGCGCTCGGGCCGGTCGCCGAGGCCGCACTCGCCCGCGGCGTCGCCGGGCTGCGGGAGCTCCGGCTGCAGGTCGGCCGCCCGTTGCAGCCGATGCTCGCCCAGACCGCCACCAGCGTCGAGGCCGCCCTCGCCAGGGCCGGGGCCTCGGGCTCTGCCAGGCGAGTGCCCGCCGCGGTGGAGTGGAAGCTGGACGGCGTCCGCGTCCAGCTCCACAAGGACGGCGACCAGGTGCGGGTGTTCACCCGCACGCTCGACGACATCACCGCGCGGGTGCCCGAGGTGGTCGAGACCGTGCTGGCGCTTCCCGTCGGCACCGCCGTGCTGGACGGCGAGCTGATCGCCCTGCGCGACGACGGCCGGCCGCACCCCTTCCAGGTCACCGCGGGACGGTTGGGCAGCAAGCTCGGCGTGGACCGGCTGCGCACCACGGTGCCGCTCACGCTGTTCCTGTTCGACGTGCTCCACCTCGACGGCGAGGACCTGATCGACCGGGACGGGGCCGGGCGCCACGCCGCCCTCGCGGCGGTGACCCCGGCGGCGCTGCGGGTGCCGCGGACGGTGACCGGCGACCCGGCGGCCGCCGCCGCGTTCCTCGGCGACGCGCTGGCCCGCGGCCACGAGGGCGTGCTGGTAAAGTCGCTCGCCGGGCCCTACGAGGCCGGGCGGCGCGGCGCCGGCTGGGTCAAGGTCAAGCCGGTGCACACCCTCGACCTGGTGGTGCTGGCCGCCGAGTGGGGCCACGGCCGCCGCACGGGCTGGCTGAGCAACCTGCATCTCGGCGCCCGCGACCCGGAGAGCGGCGGCTTCGTCATGCTCGGCAAGACCTTCAAGGGCCTGACCGACGAGCTGCTCCGCTGGCAGACCGAGCGCCTGCGGGAGCTGGCCGTGACCCCCATCGACGGGTGGGTCGTCCGCGTCCGCCCGGAGCTGGTCGTCGAGGTCGCCTTCGACGGCCTGCAGACCAGCCCGCGCTACCCGGGCGGGCTGGCGCTGCGGTTCGCGCGCGTCCTGCGCTACCGGGAGGACAAGCGGGCCGCCGACGCCGACACCATCGACACGGTCCGTGCGATCCACGCCGGCGCGGCCACTTGA
PROTEIN sequence
Length: 523
MGAVLLEEIAETSAAVAASSARLAKVERLAACLRRLDPDEVHPAVAFLSGELRQRQIGVGWAALREVPPPAALPSLTVAEVDAGFERIGRQAGPGSQAERRRLLTGLLSRATGDEQRFLVRLLGGELRQGALEGVMVEATARAAGIPGAEVRRALMLRGALGPVAEAALARGVAGLRELRLQVGRPLQPMLAQTATSVEAALARAGASGSARRVPAAVEWKLDGVRVQLHKDGDQVRVFTRTLDDITARVPEVVETVLALPVGTAVLDGELIALRDDGRPHPFQVTAGRLGSKLGVDRLRTTVPLTLFLFDVLHLDGEDLIDRDGAGRHAALAAVTPAALRVPRTVTGDPAAAAAFLGDALARGHEGVLVKSLAGPYEAGRRGAGWVKVKPVHTLDLVVLAAEWGHGRRTGWLSNLHLGARDPESGGFVMLGKTFKGLTDELLRWQTERLRELAVTPIDGWVVRVRPELVVEVAFDGLQTSPRYPGGLALRFARVLRYREDKRAADADTIDTVRAIHAGAAT*