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PLM3_60_coex_sep16_scaffold_10726_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(3376..4185)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000379C89F similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 225.0
  • Bit_score: 191
  • Evalue 8.00e-46
Stress response/stationary phase sigma factor SigF {ECO:0000313|EMBL:EWM65008.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 226.0
  • Bit_score: 187
  • Evalue 1.60e-44
RNA polymerase, sigma 28 subunit, sig b/f/g subfamily similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 252.0
  • Bit_score: 186
  • Evalue 7.30e-45

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAGGTGCCTGGTGTCCGCTGCCATTCCCCAGCTTCCCAACGATGAGGTCGTCGACGTCCGGCCAGGCGACCAGACGGCGGCGACCACAGTGGACGGGTGGCTGCAGGAGTACACCATCAATCGCGATCCGAAGCTGCGAGAGCGGATCATCCTGGCCTACCTGAGCGTGGCCGATCGGTTGGCCGGCCGCTACCGCCACAGCCGCGGGACCAGCCCCGAGGACCTGGCCCAGACCGCCCGGGCCGGACTGATCGCCGCCATCGACCGCTACGACCCGGCCAAGTGCCCAGCGTTCGTCCCCTTTGCAGTCGCCTGCGTGGTCGGCGACCTGAAACGCCACCTGCGCGACACCAGCTGGCGGCTGCAGGTCCCTCGCTCCCTCAAGGAGCAAGCGTTGCGGCTGTGCAGAGCGGCCGACGAGCTGCACCAGACCCTCGGCCGCACCCCCACCACGACCGAGCTGGCCGAGCACCTGGAAGTGAGCGAGGAGGAGATCCTGGACGCGTTGGCGGCCGCGACCAGCCGCCGGGAGGTATCCCTGGACCAGTCAGCGGGTGACGACACCGACGTTCGTCTCGGCGATCTGGTGGCCGCCCCCCAGCCCAGGGAGGAACTAGAAGACCTGTTGACTCTGCCCGGCCTGGTCGCCGCGCTGCCCAACCTGGAACGCGAAGTCATCGTCATGCGGTTCTTCCACGACCTGGACCAATACGCCATCGCTGCCAAGGTCGGCTGCTCACAGATGCACGTGTCGCGGCTGCAGCGCCGCGCCCTGACCCGCTTGCGCGCTCAGCTGATGGAACTCTGA
PROTEIN sequence
Length: 270
MRCLVSAAIPQLPNDEVVDVRPGDQTAATTVDGWLQEYTINRDPKLRERIILAYLSVADRLAGRYRHSRGTSPEDLAQTARAGLIAAIDRYDPAKCPAFVPFAVACVVGDLKRHLRDTSWRLQVPRSLKEQALRLCRAADELHQTLGRTPTTTELAEHLEVSEEEILDALAAATSRREVSLDQSAGDDTDVRLGDLVAAPQPREELEDLLTLPGLVAALPNLEREVIVMRFFHDLDQYAIAAKVGCSQMHVSRLQRRALTRLRAQLMEL*