ggKbase home page

PLM3_60_coex_sep16_scaffold_11829_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1176..1754)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces sp. CcalMP-8W RepID=UPI00037B3F18 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 188.0
  • Bit_score: 142
  • Evalue 2.30e-31
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 181.0
  • Bit_score: 139
  • Evalue 9.50e-31
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 7.70e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 579
ATGGACACCCCACCGGAGCTGCCCGCCCGCCTGGCCCGCGACCTGGACGGCGCCTTCGAGGAGCTGGTCCGCGGGCACGAGCGGCTCCTCTTTGGCCTGGCGCTGCGGGTCGTCGGCAACGCCCACGACGCCGAGGAGGTCGCCCAGGACGCGTTCGAGCGCGCCTACCACGCGCTCTCGGGCTACCCGGCGGAGCGCGTGGCGGCGATGCGGCTGCGGCCGTGGCTGGCCCGGATCGCGCTGAACCTGGCGCGCAACCGGCTGCGGCGCCGCACGCCGCCGACGCGGCCGCTGGAGACCGCCGACGGCGAGCCGCTGCCGCTGGCCGCGCAGGCCGGCGGCGAGCCCGCCGCCGTGGCCGAGCGCCACCAGGACCGCGAGCTGTGGGCCGAGCTGCTGGCCGGCCTGCCGGCCCGCTACCGGGAGGCGGTGGTGCTGCGGCACGTCGAGGACCTGCCGTACGCGGAGGTCGCCGAGGTGCTCGGCCAGCCGGTGGGCACGGTCAAGACCCACGTGCACCGGGGGGTGCGGCTGTTGCGGGTCGCCTTCGAGGCGAGGAAGGAGACGCTGGCGAGATGA
PROTEIN sequence
Length: 193
MDTPPELPARLARDLDGAFEELVRGHERLLFGLALRVVGNAHDAEEVAQDAFERAYHALSGYPAERVAAMRLRPWLARIALNLARNRLRRRTPPTRPLETADGEPLPLAAQAGGEPAAVAERHQDRELWAELLAGLPARYREAVVLRHVEDLPYAEVAEVLGQPVGTVKTHVHRGVRLLRVAFEARKETLAR*