ggKbase home page

PLM3_60_coex_sep16_scaffold_12496_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 377..925

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit Tax=Frankia sp. CN3 RepID=G6H9L6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 138.0
  • Bit_score: 190
  • Evalue 9.20e-46
potH; putrescine ABC transporter membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 135.0
  • Bit_score: 186
  • Evalue 4.90e-45
Putrescine transport protein (ABC superfamily, membrane) {ECO:0000313|EMBL:CAJ65457.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 135.0
  • Bit_score: 186
  • Evalue 2.40e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCGCTCGCGGCGGCAGGCTCACGCCCTACCTGGTCGGGCTGCCGGGTGGCCTGTGGCTCGGGATCTTCTTCGTGGTCCCGATCCTGGTCATGCTGTCGCTGTCGCTGCAGAGCGGGAACGCCGAAGAGGGCTTCAGGTTCACCTGGGCGTGGTCGAACTACGCCGACGCGTGGGAGTTCTACCACACCCAGTTCGTGCGCTCGATCATCTACGGGCTGATCGTCACGGTCCTCTGCCTGGTCCTGGCCTACCCGATGGCCTACTGGATCGCCTTCTACGGCGGCAGCCGCAAGTCGACCTACCTGTTCCTGATCCTGCTGCCGTTCTTCGTCTCGTTCGTCATCCGCACCGCCTCGTGGAAGTTCATCCTGAACGACGAGGGGTTCGTCTTCGGGCCGCTGAAGGACGCCCGTTGTACGTGGCCCTGGAGCGGATCGACCCCAGCCTGGTCGAGGCCGCCTACGACCTGTTCGCCAGCCGCTCCCAGGCGTTCCGGCGGGTGGTGTTCCCGCTGTCCCTGCCAGGGGTGTTCGCCGGCGTGCTGA
PROTEIN sequence
Length: 183
MSARGGRLTPYLVGLPGGLWLGIFFVVPILVMLSLSLQSGNAEEGFRFTWAWSNYADAWEFYHTQFVRSIIYGLIVTVLCLVLAYPMAYWIAFYGGSRKSTYLFLILLPFFVSFVIRTASWKFILNDEGFVFGPLKDARCTWPWSGSTPAWSRPPTTCSPAAPRRSGGWCSRCPCQGCSPAC*