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PLM3_60_coex_sep16_scaffold_20506_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 789..1490

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Frankia sp. BCU110501 RepID=UPI00037A69E0 similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 230.0
  • Bit_score: 124
  • Evalue 1.40e-25
putative GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 230.0
  • Bit_score: 124
  • Evalue 3.80e-26
Putative GAF sensor protein {ECO:0000313|EMBL:ABW09722.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 230.0
  • Bit_score: 124
  • Evalue 1.90e-25

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGGGCAGCGACCCCGAGGAGCTCGCCGCAACGCTGCGCGAGCTTGCGCGCCTGGACCCGGTCCAGCTCGGCCTTGCGGCCGTGCTGGAACAGATCGTGCAGGCCGCCGCGACCGGCTGCGGCAGCAGCGGCGGCGTCGGCCTGCTGCTGCTCGGCTCCGACGCCAAGCTCCGCTACGTCGTCGCGGCGGGCCGGCCCCGACGCTTGCTGGCCGGCACCCAGGTCCGGCTCGCTGAAGGCCCGTCGGTGGACGCGTTCTTGCAGGCTGCGCCGGTTTCCAGCAGCGATCTTGCCGCCGAGCCTCGCTGGCCCGACTTTCGCCCGCTGGCGCTGGCGGCGGGCATCCGAGCGTGGCTGAGCGTGCCGGTGCACCAGCGCCACGGCCCCATCGGCGCGCTCGACTTCGCCCGCACCGACCCGCGGCCGTGGCGGCCCCACGACCTGACGGCCGCCGACGCCTACGCGCAGCTGCTCATGGCGACCCTGCGGCTGGCCACCGCACGGCAGCAGGAGCGGCTCTCCCCGGCGCTGCGGTTCGCGGTCCAGCACGACACCCGGATCGAGCAGGCACGTGGCGTCATCATGCAGCGCGAACGGCTCGACCAGTCCGCTGCGGTCGAGCTGCTACATCTACAGGCCCAGATCGAGGGCCAACCGATCCGCGCCGTCGCCGAACGCCTCCTCGCCCGCCCCCGACCCTGA
PROTEIN sequence
Length: 234
VGSDPEELAATLRELARLDPVQLGLAAVLEQIVQAAATGCGSSGGVGLLLLGSDAKLRYVVAAGRPRRLLAGTQVRLAEGPSVDAFLQAAPVSSSDLAAEPRWPDFRPLALAAGIRAWLSVPVHQRHGPIGALDFARTDPRPWRPHDLTAADAYAQLLMATLRLATARQQERLSPALRFAVQHDTRIEQARGVIMQRERLDQSAAVELLHLQAQIEGQPIRAVAERLLARPRP*