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PLM3_60_coex_sep16_scaffold_20707_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 249..764

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily protein RNA polymerase sigma-24 subunit Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N0Y1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 162.0
  • Bit_score: 112
  • Evalue 3.90e-22
ECF subfamily protein RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIF90678.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 162.0
  • Bit_score: 112
  • Evalue 5.50e-22
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 173.0
  • Bit_score: 105
  • Evalue 7.90e-21

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Taxonomy

Streptomyces tsukubaensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGACCCGGAGGGCGTGATCGGCTTCTGCGACCGCGTCCGGCCGCGGCTGGTCGGCACGCTCAGCCTGCTCTGCGGCGACGGGGACGCTGCCGAGGAGCTGGCACAGGAGACGCTGGCGCGGGTGTGGCTGCGCTGGTCTCGGGTGCGGGAGCTGGGCGAGCCCTTGGCCACCGCCTGGACCTACCGGGTCGCGATCAACCTGGCCAACTCATGGTTCCGGCGCCGGATAGCGGAGCGGCGGGCACGCGCACGGCTGGCCGCGGGGGCGGCCAGCGCGCACCTCGACCCGGATCCGGCCGACGCCGTCGCCATCCGCCAGGCGGTCGCCGCCCTCCCGCGGCGCCAGCGCACCGCGGTGGTGCTGCGCTACTACGCCGACCTGCCAGTCGCCGAGGTCGCGGCCCTGATGGGCTGTGCGCCTGGGACGGTGAAGTCACTTACCAGTAAGGCGCTGACCGCGCTGCGCCGGGTCGAGGGCATGCAGGTCGTCGAGGAGGTCGCCGATGGCCCCTGA
PROTEIN sequence
Length: 172
MDPEGVIGFCDRVRPRLVGTLSLLCGDGDAAEELAQETLARVWLRWSRVRELGEPLATAWTYRVAINLANSWFRRRIAERRARARLAAGAASAHLDPDPADAVAIRQAVAALPRRQRTAVVLRYYADLPVAEVAALMGCAPGTVKSLTSKALTALRRVEGMQVVEEVADGP*