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PLM3_60_coex_sep16_scaffold_22954_8

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 4620..5138

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 182
  • Evalue 3.10e-43
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 182
  • Evalue 8.80e-44
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 182
  • Evalue 4.30e-43

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGATCGGGCCATCGTTTCCCGCTGTGCTCGCAGCGGCCCAGCGCGGCGACGAGCAGGCGTTCGCGGTGCTGTGGCGGGAGCTCCAGCCGGCGGTCCTCCGCTACCTGCGGGTGGCGGCGCCGGAGGCGGCGGAGGATCTCGCCGCCGACACCTGGGTGTCGGTCCTCCGCGGGCTCGCGCGCTTCCGGGGTGACGAGCAAGGCTTCCGGGCCCTGATCTTCACCGCCGCCCGCCATCGGGCGCTCGACTGGCGCCGCCAGTCGTCCCGCAGGCAGGCCGCGTCAGTGCCCATCGAGGACCTGTACGACCGGCCGGCGCCCGACGACCCCGCCGAGGCGGTGCTGGAGGCGCAGTCGACCCGCGCCGCGCTCGCGCTGATCGCCGAGCTGCCTCGAAACCAGGCCGAGGTGGTGACCCTGCGGATGGTGGCCGGCCTGGACGTCGCCCAGGTCGCCAGGATCGTCGGCAAGCGTCCCTCGCCCAGCGGCTGGCAGCGGTCGAGCCCACACGCAGGGTAA
PROTEIN sequence
Length: 173
MIGPSFPAVLAAAQRGDEQAFAVLWRELQPAVLRYLRVAAPEAAEDLAADTWVSVLRGLARFRGDEQGFRALIFTAARHRALDWRRQSSRRQAASVPIEDLYDRPAPDDPAEAVLEAQSTRAALALIAELPRNQAEVVTLRMVAGLDVAQVARIVGKRPSPSGWQRSSPHAG*