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PLM3_60_coex_sep16_scaffold_29966_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 1932..2444

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B559C6 similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 168.0
  • Bit_score: 199
  • Evalue 1.90e-48
GAF domain-containing protein {ECO:0000313|EMBL:EIV95297.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 143.0
  • Bit_score: 94
  • Evalue 9.00e-17
putative GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 148.0
  • Bit_score: 90
  • Evalue 2.60e-16

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCGGATGTCTGCTGGGGAGGTCCGTCAGGCGCTTCGGGAGTTGGACGATCTGCGCTACTCCGCCGGCGACCTGGACCAGGCGCTGCGCCGGATCGTGCTTGCCACCCACCGGCTGTTCGCCGTGGACGGGGCGGGGCTGATGCTGCTGGACCCCGATCAGGTGCTCCGCAACGTGGCCGTCTCCGACCAGCGGGTGGACCACCTGGAGCAGCTGCAGATCGAGCATGGCGAGGGACCCTGCGTCGACGCGTTCGAGCAGAAGACCCTTGTTGACGCCGCCGACCTCGCCGCCGAGGGCCGCTGGCCGTCGTTCTCCCCCGCGGCGGCCGAGCGGGGCTTGCGGGCGGTGCTGGCCAGCCCCATCCCCTACAACCAGCACGCCATCGGGGTGGTGGCGGTCTTCTCGGCCAAGGTGCGGCCCTGGTCCCCAGAGGGCGAGCTGACCCTGATCAGCTTCACCGACCTGGCCGCGCTGGGCTCTGTTGCGTCTGGTCAGCGCGCGGCATGCTGA
PROTEIN sequence
Length: 171
MRMSAGEVRQALRELDDLRYSAGDLDQALRRIVLATHRLFAVDGAGLMLLDPDQVLRNVAVSDQRVDHLEQLQIEHGEGPCVDAFEQKTLVDAADLAAEGRWPSFSPAAAERGLRAVLASPIPYNQHAIGVVAVFSAKVRPWSPEGELTLISFTDLAALGSVASGQRAAC*