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PLM3_60_coex_sep16_scaffold_44922_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 2..427

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 131.0
  • Bit_score: 132
  • Evalue 4.20e-28
Ribonuclease VapC Tax=Mycobacterium canettii RepID=G0TJE4_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 131
  • Evalue 3.90e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 131
  • Evalue 1.10e-28

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Taxonomy

Knoellia subterranea → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GCGCGAGCCCGACGACGTCGCCTCGCCGTGACCGTCCTGGCCGACACCTCGGCCTGGGTCGAGTACCTCCGCGGCACCAGGAGCCCCGCCCACTTGCAGCTTCGCCGCCTGATCGCCGACGAGGCCGCGGTGGCCACCACCGAGGTGGTGGTGATGGAGCTGCTCGCCGGTGCGTCCGACGACGAGGAGCTGACGCGGCTGAGCCGGCTGCTCGGTCGCTTCGAGCTCCTCCCCGTCGAGGGGCTCGCCGACTACGAGGCCGCCGCCGAGCTGTACCGCCGCTGCCGGCGCGCGGGCGAGACCGTCCGCAAGCTCAGCGACTGCCTGATCGCCGTCGTCGCCATCCGGGCCGGCGCCGCGCTGCTCCACCGCGACCAGGACTTCGAGGTGATCGCCCGCCACGCGCCGCTGCGGGTGGCCGGGTAG
PROTEIN sequence
Length: 142
ARARRRRLAVTVLADTSAWVEYLRGTRSPAHLQLRRLIADEAAVATTEVVVMELLAGASDDEELTRLSRLLGRFELLPVEGLADYEAAAELYRRCRRAGETVRKLSDCLIAVVAIRAGAALLHRDQDFEVIARHAPLRVAG*