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PLM4_32_b1_sep16_Acidobacteria_64_8

PLM4_32cm_b1_sep2016_RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated_64_8
In projects: PLM4_32cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated  →  Acidobacteria  →  Bacteria

Displaying items 1-50 of 595 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_32_b1_sep16_scaffold_1739
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (100%)
18 10815 bp 65.12 11.30 89.15
PLM4_32_b1_sep16_scaffold_1863
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (64.29%)
14 12853 bp 64.80 10.77 96.00
PLM4_32_b1_sep16_scaffold_2287
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (71.43%)
14 11575 bp 62.16 8.22 85.35
PLM4_32_b1_sep16_scaffold_14255
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
13 9088 bp 64.52 7.82 93.19
PLM4_32_b1_sep16_scaffold_10918
Phylum: Acidobacteria (100%)
13 11940 bp 63.84 10.77 88.67
PLM4_32_b1_sep16_scaffold_3348
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (83.33%)
12 10572 bp 63.06 7.18 90.64
PLM4_32_b1_sep16_scaffold_14195
Phylum: Acidobacteria (66.67%)
12 10003 bp 65.56 7.92 91.41
PLM4_32_b1_sep16_scaffold_13983
Phylum: Acidobacteria (72.73%)
11 6773 bp 65.38 8.28 88.99
PLM4_32_b1_sep16_scaffold_14712
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (72.73%)
11 12600 bp 62.68 8.62 93.62
PLM4_32_b1_sep16_scaffold_3224
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (63.64%)
11 8807 bp 65.81 8.53 96.71
PLM4_32_b1_sep16_scaffold_3277
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (81.82%)
11 13126 bp 65.89 8.32 91.88
PLM4_32_b1_sep16_scaffold_3105
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
11 10235 bp 65.22 9.83 88.05
PLM4_32_b1_sep16_scaffold_7191
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (90.91%)
11 7705 bp 66.33 7.67 99.91
PLM4_32_b1_sep16_scaffold_12940
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (63.64%)
11 8548 bp 62.80 7.69 91.92
PLM4_32_b1_sep16_scaffold_10558
Domain: Bacteria (90.91%)
11 8819 bp 64.09 8.86 94.67
PLM4_32_b1_sep16_scaffold_3743
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (90%)
10 7325 bp 64.68 9.73 91.86
PLM4_32_b1_sep16_scaffold_6178
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
10 7377 bp 64.76 10.31 100.16
PLM4_32_b1_sep16_scaffold_2513
Domain: Bacteria (80%)
10 11413 bp 65.87 9.55 93.45
PLM4_32_b1_sep16_scaffold_8155
Domain: Bacteria (100%)
10 7484 bp 65.27 8.62 97.13
PLM4_32_b1_sep16_scaffold_4245
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (90%)
10 7797 bp 63.20 9.50 92.77
PLM4_32_b1_sep16_scaffold_3841
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (90%)
10 9675 bp 65.12 9.63 96.71
PLM4_32_b1_sep16_scaffold_14853
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (60%)
10 7240 bp 64.48 8.72 97.62
PLM4_32_b1_sep16_scaffold_1966
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (80%)
10 8217 bp 64.52 8.74 99.27
PLM4_32_b1_sep16_scaffold_19341
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
10 4870 bp 66.49 7.58 87.47
PLM4_32_b1_sep16_scaffold_1554
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (80%)
10 9161 bp 63.94 9.58 92.41
PLM4_32_b1_sep16_scaffold_15084
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (77.78%)
9 9583 bp 64.06 7.87 85.62
PLM4_32_b1_sep16_scaffold_32172
Domain: Bacteria (100%)
9 5919 bp 64.10 8.06 94.48
PLM4_32_b1_sep16_scaffold_5078
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (77.78%)
9 7628 bp 65.18 8.67 96.59
PLM4_32_b1_sep16_scaffold_49685
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (55.56%)
9 5009 bp 65.28 6.20 86.72
PLM4_32_b1_sep16_scaffold_5601
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (66.67%)
9 8525 bp 64.54 9.27 94.63
PLM4_32_b1_sep16_scaffold_13271
Phylum: Acidobacteria (66.67%)
9 7591 bp 65.04 8.67 98.76
PLM4_32_b1_sep16_scaffold_72717
Species: RHI_Gammaproteobacteria_63_22 (88.89%)
9 3391 bp 60.37 6.02 90.68
PLM4_32_b1_sep16_scaffold_8730
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (55.56%)
9 11015 bp 65.72 7.54 98.95
PLM4_32_b1_sep16_scaffold_11859
Phylum: Acidobacteria (77.78%)
9 6977 bp 64.43 7.76 94.51
PLM4_32_b1_sep16_scaffold_12959
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
9 6360 bp 62.70 9.32 94.72
PLM4_32_b1_sep16_scaffold_25609
Phylum: Acidobacteria (55.56%)
9 6400 bp 64.03 6.56 92.06
PLM4_32_b1_sep16_scaffold_6339
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
9 6985 bp 63.89 9.04 99.64
PLM4_32_b1_sep16_scaffold_25126
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (88.89%)
9 6683 bp 62.10 12.46 92.56
PLM4_32_b1_sep16_scaffold_11945
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (87.5%)
8 5456 bp 63.78 10.39 100.68
PLM4_32_b1_sep16_scaffold_23285
Domain: Bacteria (62.5%)
8 6148 bp 65.63 5.15 92.57
PLM4_32_b1_sep16_scaffold_4414
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (62.5%)
8 7667 bp 63.41 10.84 75.87
PLM4_32_b1_sep16_scaffold_11465
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
8 5989 bp 64.52 10.47 83.65
PLM4_32_b1_sep16_scaffold_4170
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (62.5%)
8 7527 bp 64.62 8.05 98.37
PLM4_32_b1_sep16_scaffold_4432
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
8 5589 bp 63.41 7.73 98.82
PLM4_32_b1_sep16_scaffold_4972
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
8 5292 bp 63.70 9.24 96.83
PLM4_32_b1_sep16_scaffold_2256
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (87.5%)
8 8099 bp 65.17 10.37 91.23
PLM4_32_b1_sep16_scaffold_44626
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (87.5%)
8 3573 bp 61.54 7.85 89.00
PLM4_32_b1_sep16_scaffold_1909
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (75%)
8 8340 bp 63.49 8.90 92.84
PLM4_32_b1_sep16_scaffold_16282
Phylum: Acidobacteria (62.5%)
8 8388 bp 63.59 7.06 73.57
PLM4_32_b1_sep16_scaffold_7385
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
8 8795 bp 64.74 8.73 87.42
Displaying items 1-50 of 595 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.