ggKbase home page

PLM4_32_b1_sep16_scaffold_2786_4

Organism: PLM4_32_b1_sep16_Chitinimonas_koreensis_64_14

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1486..4851)

Top 3 Functional Annotations

Value Algorithm Source
Putative CHASE/GGDEF/EAL domain-containing signal transduction protein Tax=Variovorax paradoxus B4 RepID=T1XEM4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 1094.0
  • Bit_score: 899
  • Evalue 1.90e-258
putative CHASE/GGDEF/EAL domain-containing signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 1094.0
  • Bit_score: 899
  • Evalue 5.40e-259
Putative CHASE/GGDEF/EAL domain-containing signal transduction protein {ECO:0000313|EMBL:AGU50779.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 1094.0
  • Bit_score: 899
  • Evalue 2.70e-258

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3366
TTGGAGGGGTGCGAAAGGGAAATGACCGCGAGCAACCACGAAAAGAGCGCGCAGAAGCGCAGCAAGCCCTTCTTCCCTTTTGTAGCTCTGGGGATCGGGGTCTCTCTATCAATACTGCTGCACTTTGTTATCAAAGACAAAGTCGAAAGCGAGGCGCAGCTGCGGTTTGAGCGCCAGGCGAGCGACGCGAAGCACGTCATCGACCAGCGGGTCCGCTCCTATACGGACGTCATCTACGGGGTTGGAGCGCTGTTCCGCACCTCAGGATCCATCTCCCGCGCACAGTTTCACCGATACGTGTCGGGGTTAGATCTGGAGAGCAGATACCCCGGCTTCCAGATCATCAACTACGCGGAGTACGTTCCGCATCAAAACAAGTCGGATTTCGAAACGCGCGTCAGACGCGACACCGGCCTTGATCCGGGCGGCTATCCCAATTTCGGCGTCAAGCCGGCGGGCAACCGGCCTGATTACTACGTCCTGACCTACATCGAGCCGATGGAGGGGAATGGATTTTCCTTCGGGCTCGACATGGCAGTTAATCCCCTAACGGCCGCCGCGCTCGCCACTGGCCGAGACTCGGGCCAACTGCTCTCTTCCGGCCGCTTGCTCCGTATTGAGGGGCCGAACCGACACGTTGGCTTTGGAATACGCCTGCCGGTGTATCGGCCGGGAACGCCGATCAATTCCGTGGAAGAACGCCGCGTTGCTTACGTTGGGTCGATTGGCGCGGGGTTTCGCGTCAAGGAGCTCATGAAAGGCGTTCTGCATGAGAACACGCAGCAATACTTTCGATTCAGGATCTACGACACCGGCCCGGCCCAGGGAAAACGCCCCCCGAGCGTCGCCGCTGACCAGCTCCTGTTTGACAGCCACGACCTCGTCGGTTCCACGCCGACGACGTCTCCGGATGCGAGTTCGACGACACATTTCACCTCCGTCCTGCCGATAGAGGTAGCCCGCCGGGTTTGGGAAATCCACTTCAGCGCAGGCAAGGGTGCGATCATCGATCGCACCGCCGCGCTGCGGCCCTGGGGGGCTCTGATCGCGGGGTTGATCTCGAGCGTCCTGCTGTTTATCGCCCTCTATTCGCTCGCTTCCTCGCGTAGTCGTGCGGTCGGGATTGCCGAAGTCATCACCAAGGACCTGCGCGAAAGCGAGGCGAGCCTTGCCGAAGCGCAGCGCATTGCACGCCTGGGGAACTGGTCGCTGTACCGGTCCTCCGGAATCATGACCTGGTCCGCGGAGACGTACCGCATTTTCGGCCTCGATCCGAATTCGTCCGCACCGAGCTACGACGAATTCCTGAAAAGGATCCACCCCAAGGACCGGCTCGAGCTCAACCAGGCGCTGGAAAACGCGGCCCACATTAAACAGATCTGCGAGATCGACCACCGGATCTTGCTGGAGGACGGAACCGTCCGCTGGACCCACACGATCGCCCAGGCTGTCGGGCAGGACGGCGAAGCGCGCGTCCACGGGACAGTCCGGGACATTACCGAGCGCATGGTGAACATCCTCCGCGTGCAGGCTGAATACACGGTCACACAGCTCGTCTCCGGCGCTCCCGACCCCGGGGAGATTATTCCCGGGATCATCGAGGTCCTGTGTACGAAACTCGGGTGGGAATGTGGCGCCCACTGGAGGCTGGACGAGGAGGGCTCCCTCCTGCGGAGCTCTGCATCCTGGGGCGGAAGCGAAGCCGGAATCCGGGAGTTTCTTGCGCTCACGGGAAAGATGACGGCTCCCAGCGGGGTCGACCTTCCCGGCCGCGCCTGGGCGAAGGGCGAGCCTATTTTCGTCGAAGACATCGCCTTGGAACAGGGATTCAGCAGGATGCAGGCGGCGTTGCAGGCCGGGCTGCGCGGTGCGCTCGCTCTCCCGATTGCGTCGGGGGGCAAGACGTTCGGGGTGATCGAACTTTTCAGCACCCAGCCGATCCGTCCCGACGAGGCACTGACGCACTTCCTGCTTTCGGTTGGCGCCCAGATCGGGCAGTCCTTCCAGCGCAGGCTTGCCGAAGATCGCCTTCGCTTCATTGCCTCCCATGACTCTCTCACCGATCTGCCCAACCGCAGCATGCTCAACGAGCGGCTGAAGCACGCCCTGCACCAGGGCGCCCGCTACAACCGGGGTATCGCGGTCATGTTCATCGATATCGACCGCTTCAAGGTGATCAACGACTCACTCGGACACAGTGCCGGGGACCGCATGCTCCAGGATTGCGCCAGGCGGCTCACCGAGTGCCTGCGCGAGAGCGACACCATCGCGCGCCTCGGCGGCGATGAATTCGTCGTGATGATCGAAAACTTCACTGCCCCACGGGACGCGATCGTGGTGGCGCAAAAGGTCCTCGTCGGAATGGCGAAGCCGTTCTTCGTGGACGGGCAGGAGTTCCTCGTGTCGGCCAGCATCGGCATCAGCACCTTCCCCGACGACGGCGCGGACGCAGAGACGCTGCTCAAGAACGCCGACATCGCGATGTACCGGGCGAAAGACCTGGGCCGCAACAACTATCAGTTCTACTCGGCGCAAATGAACAAGCACACGTTCGAGCGCCTCGCGATGGAATCGAGCCTGCGCCGTGCCGTGGAGCGCAACGAGTTCCTGCTTCACTACCAACCGAAGCTCGACCTGCGCACGGGCGCAATCGCAGGCGTGGAGGCACTGGTGCGCTGGCAGCACCCCGACTGGGGCATGGTCTCGCCCGCCCAGTTCATTCCGCTGGCGGAGGAGACCGGCCTGATCGTGCAGATCGGCGAATGGGTCCTCAGGACCGCGTGCGAGCAGAGCCGAAAGTGGCGCGAAGAGGGGATTCCCGCCCTTCGCATAGCGGTCAATCTGTCCGCGCGCCAGTTCGCGCAGAAGACCCTTCTGCGCGACGTCGGCAGAATCATCGCCGAGAGCGGGCTCACGCCCGAGTCCCTCGAGCTCGAAATCACCGAAAGCCTGGTGATGCACAACCCGGAACAAGCCACGCAGACCCTGGAAGAGCTCAAAGCGATGGGGATCAGCCTATCGATCGACGATTTCGGCACCGGCTATTCCTCCCTCTCCTACTTGAAGCGCTTCCCGCTCGACTGCGTCAAGATCGACCGATCCTTCATCAAGGACATTCCGGTCGACGCCGACGACATGGCGATCACCAAGGGCGTGATCGCGTTGGGCCACAGCCTGAGGCTCAAGGTCGTCGCCGAAGGCGTAGAGACCGCTGAACAGCTCGATTTCCTGCGAGCCAACGATTGCGACGAGCTGCAGGGCTTTTTTTTCAGCAAGCCGCTACCCTCGGAGGAGGTCACTACATTCCTCAAAAACCACACGCCGAAACCTCACTTGAAAGTCGTAGAGCCGCGGAAGCGGGCTTAG
PROTEIN sequence
Length: 1122
LEGCEREMTASNHEKSAQKRSKPFFPFVALGIGVSLSILLHFVIKDKVESEAQLRFERQASDAKHVIDQRVRSYTDVIYGVGALFRTSGSISRAQFHRYVSGLDLESRYPGFQIINYAEYVPHQNKSDFETRVRRDTGLDPGGYPNFGVKPAGNRPDYYVLTYIEPMEGNGFSFGLDMAVNPLTAAALATGRDSGQLLSSGRLLRIEGPNRHVGFGIRLPVYRPGTPINSVEERRVAYVGSIGAGFRVKELMKGVLHENTQQYFRFRIYDTGPAQGKRPPSVAADQLLFDSHDLVGSTPTTSPDASSTTHFTSVLPIEVARRVWEIHFSAGKGAIIDRTAALRPWGALIAGLISSVLLFIALYSLASSRSRAVGIAEVITKDLRESEASLAEAQRIARLGNWSLYRSSGIMTWSAETYRIFGLDPNSSAPSYDEFLKRIHPKDRLELNQALENAAHIKQICEIDHRILLEDGTVRWTHTIAQAVGQDGEARVHGTVRDITERMVNILRVQAEYTVTQLVSGAPDPGEIIPGIIEVLCTKLGWECGAHWRLDEEGSLLRSSASWGGSEAGIREFLALTGKMTAPSGVDLPGRAWAKGEPIFVEDIALEQGFSRMQAALQAGLRGALALPIASGGKTFGVIELFSTQPIRPDEALTHFLLSVGAQIGQSFQRRLAEDRLRFIASHDSLTDLPNRSMLNERLKHALHQGARYNRGIAVMFIDIDRFKVINDSLGHSAGDRMLQDCARRLTECLRESDTIARLGGDEFVVMIENFTAPRDAIVVAQKVLVGMAKPFFVDGQEFLVSASIGISTFPDDGADAETLLKNADIAMYRAKDLGRNNYQFYSAQMNKHTFERLAMESSLRRAVERNEFLLHYQPKLDLRTGAIAGVEALVRWQHPDWGMVSPAQFIPLAEETGLIVQIGEWVLRTACEQSRKWREEGIPALRIAVNLSARQFAQKTLLRDVGRIIAESGLTPESLELEITESLVMHNPEQATQTLEELKAMGISLSIDDFGTGYSSLSYLKRFPLDCVKIDRSFIKDIPVDADDMAITKGVIALGHSLRLKVVAEGVETAEQLDFLRANDCDELQGFFFSKPLPSEEVTTFLKNHTPKPHLKVVEPRKRA*