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PLM4_32_coex_redo_sep16_scaffold_540_14

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(10700..11941)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 411.0
  • Bit_score: 405
  • Evalue 4.10e-110
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 408.0
  • Bit_score: 373
  • Evalue 4.90e-101
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 413.0
  • Bit_score: 428
  • Evalue 8.40e-117

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Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGCGTCCGACCTCAAAGACAGGTTGAGCGCGCTCAAGATCGAGCGCGACGAGCGTCCACCGTCCGCCTGGACGCCGATCCGGATCGGGATCCTCGCCGCCGTCATCGTCGCCCTCGGGATCGCGGGCTTCTGGGCGCTCCGCCCGAGAGCCGTCAGGGTCAGAACCGCGGTCGTGCAGGAGACGACGCGGGCGCAGGGGGGCGCCGCCGCCGTCCTCAACGCCTCCGGCTACGTCACCGCCCGCCGTCAGTCGACGGTGTCATCGAAGATCACCGGCAAGGTCGTCGACGTTCTCGTCGAGGAGGGCATGCAGGTCAAGAAGGGGCAGGTGCTCGCCCGCCTCGACGGGAGCCAAGCACAGCAGGCCCTCGGCCTGTCCGAAGCGCAGCTCGAGGCGTCGCGGCGCGTGATCAACGAGACCGAGGCGCGCCTGCGCGAGGCGACGATCCGCAAGAACCGGATCTCCGGGCTCGCGGCGCAGGGGGTCGCCTCGCCCTCCGACCGCGACGCCGTCGAGGCCGAGGTCGACGTCCTGCAGGCCCAGCTCGCCACCCAGCACCAGCGGGTGCGCGCCGGGGAGCGCGAGGTCGCCATCGCCCGCCAGAACCTCGACGACACCGTGATCCGCTCCCCCTTCGACGGGGTCGCGATCTCGAAGAACGCCCAGCCCGGCGAGATCATCTCGCCGATGTCCGCGGGCGGCGGCTTCACGCGCACGGGGATCTCGACGATCGTCGACATGAGCTCCCTCGAGATCGAGGTGGACGTCAACGAGGCGTACATCCAGCGCGTCCTCCCCGGCCAGGCGGTGCAGGCGACCCTCGACGCCTACCGCGATTGGCAGATCCCCGCGCACGTCATCACGACGATCCCCGCCGCCGACCGCCAGAAGGCGACGGTCACGGTGCGCATCGCCTTCGACCAGCTCGACCCGAGGATCCTCCCCGACATGGGAATCAAGGTCGCGTTCCTGGCGGGTGCGGACCCGCAGGCCGCGACCCAAGGCGGCGGCGCACGCGTCGTCCGCGTCCCGCGCGCCGCGATCCGGGGCAGCGCCGGGGAGGAATTCGTGTTCGTCGTGGGGCGCGAGGACAAGCTCGAGCGGCGCGCGATCAAGGTCGGCGCCACCGGCGACGATCCGGTGGACGTCGTGGCCGGGCTCGCCGCCGGAGAGCGCGTCGTCGTGGAAGGACCATCGGACCTGGCGGCGGGGGTCGTGATCGCCGAGCGGAACGAATGA
PROTEIN sequence
Length: 414
MASDLKDRLSALKIERDERPPSAWTPIRIGILAAVIVALGIAGFWALRPRAVRVRTAVVQETTRAQGGAAAVLNASGYVTARRQSTVSSKITGKVVDVLVEEGMQVKKGQVLARLDGSQAQQALGLSEAQLEASRRVINETEARLREATIRKNRISGLAAQGVASPSDRDAVEAEVDVLQAQLATQHQRVRAGEREVAIARQNLDDTVIRSPFDGVAISKNAQPGEIISPMSAGGGFTRTGISTIVDMSSLEIEVDVNEAYIQRVLPGQAVQATLDAYRDWQIPAHVITTIPAADRQKATVTVRIAFDQLDPRILPDMGIKVAFLAGADPQAATQGGGARVVRVPRAAIRGSAGEEFVFVVGREDKLERRAIKVGATGDDPVDVVAGLAAGERVVVEGPSDLAAGVVIAERNE*