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PLM4_32_coex_redo_sep16_scaffold_2308_2

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: 2065..3336

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM65663.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 439.0
  • Bit_score: 317
  • Evalue 2.10e-83
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 425.0
  • Bit_score: 285
  • Evalue 4.90e-74
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 447.0
  • Bit_score: 281
  • Evalue 2.60e-73

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGCCGGTGAGCGGATCCTGATCGTCGACGACGAGCCGGGCGTGCGCTCGATGCTCGAGGCGATCCTCAAGGACGACGGGTACGCGGTCGAGTCGGTCGCGTCGGGGGAGGAAGGGCTCGCGGCGGCTTCCGCAAGGCCCGCCGAGGGGATCCTCCTCGACGTGTGGCTCCCGGGGATCGACGGCCTCCAGACTCTCCAGCGCCTGCGGGACGCCGGGGTCGACGCGGAGGTCGTGATGATCTCGGGGCACGGGACGATCGACACGGCCGTGCGCGCGACCAAGCTGGGCGCGTTCGACTTCGTCGAGAAGCCCCTCTCCCTGGAGAAGACCCTGCTCGTCCTGCGCAACGCGCTGCGGCAGAGGCGCCTGGTGCGCCGCAACCGCGCGCTGCTCGACCAGCTCGCGCGCGACACCGAGTTCGTCGGCGCCTCCGAGGCCGCGGAGCGCGTGCGCCGTGAGGCGGACGCCGCCGCGGCGGTCGAGGCCCCGGTGCTCCTGTGCGGCGAGCCGGGGTCGGGACGGGAGACGGTCGCGCGGCGCATCCACGCGGGGAGCCGGCGGGCCGACCAGTCGCTCGTGCAGGTCCCCTGTCGTGCCTTGGAGGCCGGCACCGGCGCCGCCGTTCTCTTCGGCGACGGCCGCGCGACCGGGCGGCTGGCGCTCGCCCGGGGCGGGTCCGTCTTCCTCGAGGATGTCGACACCCTTCCGGAGGAGCTTCAGGCGGGCCTGTCCGGCTGGATCTCCGAGCGGCCCGACGTGCGCCTGCTCGCGAGTGCCTCCGCCGACGCCTCGGGGCTCACCCCGGCCCTTCGCAAGAACCTCGACGTGGTGCGCATCCAGGTGCCCTCCCTGCGCGAGCGGCGGGGGGACATCCGGGAGATCGCCCAACGCTTCGCGCGCGACCTCGCGCGGGAGTACGCGCGGCAGGAGAAGGTCTTCCAGCCGGATGCGCTCGCGGCGCTCGATCGCCACGACTGGCCGCGGAACCTCCGCGAGCTGCGCAACGCGGTGGAGCGGATCGTCCTCCTCTCCGGAGGGGACGACGTGCGCGTGGCCGACCTCCCGCGGGAGATCGGCGGCAAGGCGCGGGAGCTCGACGACCTCTACGGCCCGTTCGCGTCGCTCGCCGACGGGATCAAGGCCTTCGAGCGCTACTTCCTGCGCCGGGCCGTGCGGGAGGCGCACGGCGACGTCGCCGAAGCCGCACGCCGCGCGAGGATCGTGATCGGCGACCTCCGGAGAGCGTTGGCAGAGGACGAGGCGGGCTAG
PROTEIN sequence
Length: 424
MAGERILIVDDEPGVRSMLEAILKDDGYAVESVASGEEGLAAASARPAEGILLDVWLPGIDGLQTLQRLRDAGVDAEVVMISGHGTIDTAVRATKLGAFDFVEKPLSLEKTLLVLRNALRQRRLVRRNRALLDQLARDTEFVGASEAAERVRREADAAAAVEAPVLLCGEPGSGRETVARRIHAGSRRADQSLVQVPCRALEAGTGAAVLFGDGRATGRLALARGGSVFLEDVDTLPEELQAGLSGWISERPDVRLLASASADASGLTPALRKNLDVVRIQVPSLRERRGDIREIAQRFARDLAREYARQEKVFQPDALAALDRHDWPRNLRELRNAVERIVLLSGGDDVRVADLPREIGGKARELDDLYGPFASLADGIKAFERYFLRRAVREAHGDVAEAARRARIVIGDLRRALAEDEAG*