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PLM4_32_coex_redo_sep16_scaffold_2308_4

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(3935..4573)

Top 3 Functional Annotations

Value Algorithm Source
sigW; RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 185.0
  • Bit_score: 162
  • Evalue 3.10e-37
sigW_1; RNA polymerase sigma-W factor similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 185.0
  • Bit_score: 136
  • Evalue 5.20e-30
Tax=RBG_16_Aminicenantes_63_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 191.0
  • Bit_score: 171
  • Evalue 1.20e-39

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Taxonomy

RBG_16_Aminicenantes_63_16_curated → Aminicenantes → Bacteria

Sequences

DNA sequence
Length: 639
GTGAAACCGACGCACACACCTGCCGGAGCCACGAGGTCCGCAATTGCCGACCTCGCCGAGCTTACGGACGAGACGCTCGTCGACGAGGCCCTGGCGGGCGACCGGGACGCCTTCGGCGCGCTCGTGCGTCGCCACCAGCGCGGCCTCGTCAACTACATCTTCCGGCTCGTCGGCTCGCGCGACGTCGCCACGGACCTTGCACAGGAGGTCTTTCTCAAGGTCTTCGTCGGGCTCCAGAGCTTCGACCCGCGCTACCGGTTCACGACCTGGCTCTACCGCATCGCGTCCAACGGCGCGATCGACCACCTGCGACGCAAGCAGCCGAAGACGCTGTCGCTCTCGCAGCCGCCGGCGGACGACGGCACGCCGCAGGCCCCCACGCTCGCCGGCTCGGACCCGACCCCCGATGACGTGCTGCGCCTGCGCGAGCTGGAGAGCCGCCTGAACGAGGCGATCGCGGAGCTCCCGCCGGCGTACCGGCAGCTCATCCTCCTCCGGCACCGGCAGCACTGCCGCTACGACGAGATCGCGCGCATCACGCACCTGCCGCTCGGCACCGTGAAGAACCGGATCTTCCGCGCCCGCGAGATCCTCCGCGGCCAGCTCACCGACATCCTCGACCCCGAGGTGCGGCCGTGA
PROTEIN sequence
Length: 213
VKPTHTPAGATRSAIADLAELTDETLVDEALAGDRDAFGALVRRHQRGLVNYIFRLVGSRDVATDLAQEVFLKVFVGLQSFDPRYRFTTWLYRIASNGAIDHLRRKQPKTLSLSQPPADDGTPQAPTLAGSDPTPDDVLRLRELESRLNEAIAELPPAYRQLILLRHRQHCRYDEIARITHLPLGTVKNRIFRAREILRGQLTDILDPEVRP*