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PLM4_32_coex_redo_sep16_scaffold_5282_5

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(5839..7347)

Top 3 Functional Annotations

Value Algorithm Source
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 500.0
  • Bit_score: 798
  • Evalue 2.00e-228
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 453.0
  • Bit_score: 251
  • Evalue 2.60e-64
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 504.0
  • Bit_score: 806
  • Evalue 1.80e-230

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
TGCCAGCTCGTCAACGAGACGCAGGGAAAGACGTACACGCCGGTCCCGCTCACCCCCAAGGAGGATGAGATCCGCCGCTCCGGCGGCATCTTCGCCGTGGGCCGCCGTGAATTCCGCGACGCGGTCGCGACTGAGCCCCGGATCGCGTGGGCCCCGGCCGAGACGGCGCGCCGTCTGACGACGAGCGAGCAGATCCTCTGGTCGCACCGCGTGGACAAGGACGCCGAGGTCGTCCCCGGGGCGACGCTCCGCGTCTACGCGGACCTCCTCCCCGCCTCCGACGGGACCGCGCCGTTCGCGATCCACACCTTCAACCAGATCACGGGGGGCGCCACGATCCACCCGCGCCAGGCGGCGATCGCCAACGACCACTTCGTCTTCACCGGCAAGGACGCCGACGAGAAGCAGACCTCGATCGGGCGCGCGTTCGCGGCGGCGATGGGCCTCGAGCGCCCCTACTACGCGACGCCGGGGGACGGGATCTTCCACTTCTATTTCCCCGAGCAGGGGCTCGTCTACCCGGGTCAGCTCATCCCCGGGGCCGACTCGCACTCACGCGCGTACGGGGCGTACGGCGCCGTCGGCATCGGCGTCGGCTCGACGACGCTCGGCTTCGGCTGGTCCACCGGGTACGTCTACGTGACGGTCCCGAAGGCGCGCCGTGTCGCCTTCGACGGGCGGCTGCAGCCGTGGGTGTCGGGGAAGGACATCGTCCTCAAGCTCCTCGAGCGCTGGGGGACGAAGCAGTCGCAGGGGATGTCGGTCGAGCTCGTGGACGCGAAGCGCCAGCTCCCGATCGCCTACCGGAACACGATCGCGAACATGATGGCGGAGGCGGAGGCGTTCAACGGGATCTTCGCGCCCGACGAGATCACCGGCGCGTGGTTCCGGTCGAAGGGGATGACGGACCTACCGTACCCCCCTCTGTCTCCGGGTGCTGCGGCGCGGTACGAGATCGACGAGACGATCGACCTCTCGACGGTCGTCCCGATGATCGCGAAGCCGTTCTCCCCGGGGAACGCCTTCCCCGCGGAGGAGGTCGCGCGTGAGCGCCTCTCCTTCGACAAGGCGTACATCGGCTCGTGCACGAACGGGAGCTACGACGACCTCCTCGCCGCGGCGCTCGTCGTCCACGCCGCCAAGCGCGCCGGGCTCTCGAAAGCGGCGAAGGACTTCGTCGTCTTCCCCGGCTCCGGCGGGGTCAAGCACCTCATCGAGCGGGCCGAGCCGCGCTTGGGCGGCGAGTCGGTCGCCGACGTGCTGCGCGCCGCGGGTGCGCAGATCCGCGACTCGTGGTGCGGCCCGTGCTTCGGTCAGGGGCCCGATGCGTTGGCACCGGGGCAGCGCGCGATCACGTCGTTCAACCGGAACTGGCAGAACCGCATGGGGGTCGGCGGCGAGGGGTTCCTCGCCTCGCCGGCCGTCGTCGCGGCCTCGGCGCTCGCCGGGTACATGGCCCCGCCGTCGGAGCTGGGGCTGACCTGGCGGGCCGAGGAGTTCGGGGTCTAG
PROTEIN sequence
Length: 503
CQLVNETQGKTYTPVPLTPKEDEIRRSGGIFAVGRREFRDAVATEPRIAWAPAETARRLTTSEQILWSHRVDKDAEVVPGATLRVYADLLPASDGTAPFAIHTFNQITGGATIHPRQAAIANDHFVFTGKDADEKQTSIGRAFAAAMGLERPYYATPGDGIFHFYFPEQGLVYPGQLIPGADSHSRAYGAYGAVGIGVGSTTLGFGWSTGYVYVTVPKARRVAFDGRLQPWVSGKDIVLKLLERWGTKQSQGMSVELVDAKRQLPIAYRNTIANMMAEAEAFNGIFAPDEITGAWFRSKGMTDLPYPPLSPGAAARYEIDETIDLSTVVPMIAKPFSPGNAFPAEEVARERLSFDKAYIGSCTNGSYDDLLAAALVVHAAKRAGLSKAAKDFVVFPGSGGVKHLIERAEPRLGGESVADVLRAAGAQIRDSWCGPCFGQGPDALAPGQRAITSFNRNWQNRMGVGGEGFLASPAVVAASALAGYMAPPSELGLTWRAEEFGV*