ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_16112_3

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: 1214..2395

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump {ECO:0000313|EMBL:KGQ20045.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 393.0
  • Bit_score: 489
  • Evalue 2.90e-135
Secretion protein HlyD family protein bin=GWB2_Desulfobacterales_56_26 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 393.0
  • Bit_score: 469
  • Evalue 2.90e-129
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 393.0
  • Bit_score: 468
  • Evalue 1.10e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGGAAATCCTCCTTCTCGGCATCTACTCGATCTTCGTCTGGCTGATCTTCTTCAAGTTCAAGTGGCTCCCGTGGAACATCACGAGCCAAGTGATCGTGGTCACGCTACCGATCATCGCCATCACGATTCTGATCCTGCTGCTCAACATCTTCGCGCCGTCCTCGCACGACGTGCGGGTGATCAACTACGTGGTGCAAGTCGTGCCTCGGGTCGCGGGGCGCGTCGTGGAGGTTCCGGTCCAGCCCGACCGTCCCGTCAAGAAGGGGGACGTGCTCTTCAAGATCGATCCCACGCCGTTCGAGGCGCAGGTGAACGCGCTCAAGGCGAGGATCGAGGAGCTGCGGGCCAAGATCTCATCCGCGTCGGCATCCGAGCGCGAGCTCATGCAGCAGCTCAGCTCGGCACGCTCGAACACGGCGGCCATCTCCTCCCGGCTCGAGCTGGCCCGCAAGCGCGTCGGTCAGACGAAGGAACTCGCCGAATCCGGAGCAGGTCCGGCCTTCGACTACGAGCAAGCAGATGCCGACGTCAGGAGCCTGGAAGCGGACCTGAAGGCCGCGACCGCCACCGAGTCGCAGGTGATCCAGAGGCTTTCCGCGAAGACGGAGGCGGGCGAGTACTCCGACGTGGCGCAGGCCAAGTCGGCGTTCCTGCAAGCCGAGGCCAACCTCGTCGAGGCGCAGTGGCGCCTGGACGAGACGACGGTGTACGCGCCGACCGACGGCATGGTGGTCAATCTCCAGCTGCGCGCCGGCTCGGCGGTTGCGGCGTTCCCCTTGAGCCCCGCGATGAGCTTCGTGGAGAACGAGCAGTGGGTGCTGGCACTTTTTCGCCAGAATGAGCTGCGCTACATCGAGCCGGGGAACGAGGCGGAGATCGCGCTCAAGACCCACCCCAACCAGGTCCTCAAGTGCAAGGTGGACTCGATCATCTGGGCCACGGGGTCGGGACAGCTCCCGATCTCCGGAATGATCCCGCAGCAGATGACCCAGCCCGTCCCGCCCGGCTACTTCGCCGTGCGCCTCCTCCCGGAGGGCAAGTCGAAGGACGTGTTCTTGCCGGCGGGAGCCGCGGGGAGCGGCGCCGTGTACACCGAGCACGGCCACATGATCCACATCGTGCGCAAGGTCATCGTCCGGGTCGGGACCAAGCTCGACTGGCTCGTCCTCAAGCTGCACTGA
PROTEIN sequence
Length: 394
MEILLLGIYSIFVWLIFFKFKWLPWNITSQVIVVTLPIIAITILILLLNIFAPSSHDVRVINYVVQVVPRVAGRVVEVPVQPDRPVKKGDVLFKIDPTPFEAQVNALKARIEELRAKISSASASERELMQQLSSARSNTAAISSRLELARKRVGQTKELAESGAGPAFDYEQADADVRSLEADLKAATATESQVIQRLSAKTEAGEYSDVAQAKSAFLQAEANLVEAQWRLDETTVYAPTDGMVVNLQLRAGSAVAAFPLSPAMSFVENEQWVLALFRQNELRYIEPGNEAEIALKTHPNQVLKCKVDSIIWATGSGQLPISGMIPQQMTQPVPPGYFAVRLLPEGKSKDVFLPAGAAGSGAVYTEHGHMIHIVRKVIVRVGTKLDWLVLKLH*