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This organism can only be binned in the context of its binning project PLM3-1_170cm_b2_sep2016. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

PLM4_32_coex_redo_sep16_scaffold_202831_1

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3..1043

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031A032F similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 346.0
  • Bit_score: 425
  • Evalue 3.20e-116
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 346.0
  • Bit_score: 419
  • Evalue 5.00e-115
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 347.0
  • Bit_score: 569
  • Evalue 1.90e-159

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GAATACCGGGCCGTGGTCGCCGCCGGACTCGACGCCTACTCGGCGCGCGACTCCGGTCGGATCCCCCCGGACGCCCGCATGTACTTCATGCGCGACATGGGTCGCGACGGCAAGCCCGAGCCGATCCTGCTGTCCAAGCGCACGATCGTGACCGGCGACCAGCTGGTCAGCGCCAGTTCGCTGCTCGACAACCAGAGCGGCACCCCGGCGGTCTCGATCGAGTTGAACAAGCTCGGCGGCGACCGGATGTTCAAGTACACCCAGGACAACGTCGGCAAGCTGATGGCTGCGGTCTACATCGAGACCATCCCGGACGTGAAAATCGTCAACGGTCAGGAAGTGCGCACCTCGCGCGTGACCGAGGAAGTGATCAGCGCCGCGACCGTGCAAGGCGTGTTCGGCAAGAACTTCCAGACCACGGGCCTGGACAGCATGCAGGAAGCCCAGACCCTGGCCCTGCTGCTGCGCGCCGGCTCGCTGGCCGCGCCGATGGTGATCGTGGAAGAGCGGATCGTCGGCCCGAGCCTCGGCGCCGAGAACGTGGAGCGCGGCACCCAGGCAGTCATGTACTCGTTCCTGTTCGTGCTGGTGTTCTTCATCTTCTACTACAAGACCTTCGGCGTGGTGACCAATATCGCGCTGCTGCTGAACCTGCTGATCGTGATCGCGGTGATGTCGGCGCTGGGTGCGACCATGAGCCTGCCGGGCCTGGCGGGCATCGCGCTGACGGTGGGTATGTCGGTCGACGCCAACGTGCTGATCAACGAACGAATCCGCGAGGAACTGAGGATCGGCAATACGCCGCTCGCCAGTATCGCGGCCGGTTACGACAAGGCGGCGGGAACCATCGCCGACGCCAACGTGACCGCGCTGCTCGGCGGCATCGCCATGGCGGCCTTCGGCTCCGGCCCGATCCGCGGCTTCGGCATCACGCTGATCATCGGCATCCTCAGCTCCATGTACACCGCCGTGTCGGTATCGCGCGGCATCGCCACCCTGATCTATGGCCACCGGCGCAAGCTGGCCAAGATCTCGATCTGA
PROTEIN sequence
Length: 347
EYRAVVAAGLDAYSARDSGRIPPDARMYFMRDMGRDGKPEPILLSKRTIVTGDQLVSASSLLDNQSGTPAVSIELNKLGGDRMFKYTQDNVGKLMAAVYIETIPDVKIVNGQEVRTSRVTEEVISAATVQGVFGKNFQTTGLDSMQEAQTLALLLRAGSLAAPMVIVEERIVGPSLGAENVERGTQAVMYSFLFVLVFFIFYYKTFGVVTNIALLLNLLIVIAVMSALGATMSLPGLAGIALTVGMSVDANVLINERIREELRIGNTPLASIAAGYDKAAGTIADANVTALLGGIAMAAFGSGPIRGFGITLIIGILSSMYTAVSVSRGIATLIYGHRRKLAKISI*