ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_296498_2

Organism: PLM4_32_coex_sep16_Gammaproteobacteria_Xanthomonadales_66_6

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(544..1059)

Top 3 Functional Annotations

Value Algorithm Source
antimicrobial peptide ABC transporter, ATP-binding protein (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 168.0
  • Bit_score: 243
  • Evalue 3.20e-62
Efflux ABC transporter, macrolide exporter (MacB) family, ATP-binding protein Tax=Glaciecola arctica BSs20135 RepID=K6Z8H3_9ALTE similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 167.0
  • Bit_score: 256
  • Evalue 1.70e-65
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 171.0
  • Bit_score: 316
  • Evalue 1.50e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GACGTGCCGACCTCCGGTTCGTACCGGCTTGAAGGCGAGGCCGTGGACCAGATGAGCGAGGACGAGCTCGCCGAGATCCGCAACCTCAAGATCGGCTTCGTCTTCCAGACCTTCAACCTGGTGCCCCGGGTGAATGTGTTCAAGAACGTCGAGCTGCCGCTGATCTACGCCGGGCGCAACAAGGCCGACCGTCGGCGCATCGCCGAGGAAGCGATCCGCTCGGTCGGGCTGCTCGACCGGATGCACCACAAGCCGAACGAGCTGTCCGGCGGCCAGCGCCAGCGCGTGGCCATCGCCCGCGCCCTGGTCTGCAACCCGTCGATCATCCTGGCCGACGAACCGACCGGCAACCTCGACAGCGCCACCGGCGTCGAGATCATGGCGCTGCTGGGCGAGCTGCACGCCCGCGGCAACACCATCATCCTGGTCACCCACGAGGACGACATCGCCGCGCACGCCCATCGCGTGGTGCGCCTGCGCGACGGCGTGATCGAAAGCGACGTTCTTCGCCAATGA
PROTEIN sequence
Length: 172
DVPTSGSYRLEGEAVDQMSEDELAEIRNLKIGFVFQTFNLVPRVNVFKNVELPLIYAGRNKADRRRIAEEAIRSVGLLDRMHHKPNELSGGQRQRVAIARALVCNPSIILADEPTGNLDSATGVEIMALLGELHARGNTIILVTHEDDIAAHAHRVVRLRDGVIESDVLRQ*