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PLM4_32_coex_redo_sep16_scaffold_9979_1

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 2..376

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9V8_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 4.10e-53
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 1.20e-53
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ25629.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 5.70e-53

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
AAATTCGGCACCATGGTTAAAGGACTCTCTCCCGAGGCACTTGAGGCTGCCATTGCCTATGGCTGGTCAGGCAATATCCGCCAGTTGAAAAACGTCATCGAGGCCTCAATGGCCATGGAGAACGGCGATTACATAAGTCTGCCGGTAATTTCCCAGTTCATTGAGGTCCCCATGTCAGAGGGGGGATTTGGGGTTGTTGCCGAAGAAGGTGAATACGCCAAGGCCATGTCCCGTTTTGAAACCGATTACCTGAAGGGGGTATTGCGCAAAAATAACGGCAACATCGAAGCCGCTGCCCGCGAGACGGGAATGAACATGGCCACCATTTACCGGAAGATCAAGAAATACAACATCAGGAAAGAGGATTATTCATAG
PROTEIN sequence
Length: 125
KFGTMVKGLSPEALEAAIAYGWSGNIRQLKNVIEASMAMENGDYISLPVISQFIEVPMSEGGFGVVAEEGEYAKAMSRFETDYLKGVLRKNNGNIEAAARETGMNMATIYRKIKKYNIRKEDYS*