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PLM4_32_coex_redo_sep16_scaffold_17665_1

Organism: PLM4_32_coex_sep16_Deltaproteobacteria_Geobacteraceae_57_7

near complete RP 44 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 3..2846

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 947.0
  • Bit_score: 1663
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ7_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 947.0
  • Bit_score: 1663
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 947.0
  • Bit_score: 1663
  • Evalue 0.0

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2844
CCGCTCGGGGAACTGATCCTCCTCCCTTCGCGGGAGGTAATCCTGTCGGAAGAGGTCCTGGAGGAATTTGCCCCGCGCCTGAAAAAGCGCTGCGATGCCATCGAGCTGCCGGCGACCCGCCGCCGGGATCTGCTGGAGCAGCTGCAGAACGCCATCTACCCGCCCGGGATCGAGTACCTCCAGCCGCTGTTTCATCCCGGCCTGGAGACCCTCTTTGATTATGCCGGCCAGGAACTGGTCAGGGTTATCTACGACCCTGCCGCGCTGGCCGCTGCCCGTGAGAATTTTGCCGAAGAGCTGGCCGCAGCCGAGCAAAGGGCGTTCGAGCGCGACATCATCTCCTGCGACAAAGCAGATCTTTTTCTCGACGCTGACAGTGTGACACGGTTGCTTGCCGAGGGGCGGCGACTGGAGATTCCGTTCCTGGAAGTGCATGATGCGGGGGATGTGGGGGAAAAAATCAGTTTTAAGGCCGAGGAGAACAGCGACCTGAAACTTGATATTTCCACGGACAGTGAGGGTGTATTGAGGCCCCTCGTGGCAAAGCTCCTCGCCTGGCAGGCGGCGAAGAGCCGGGTGCTGATGGTCTGTCACCAGCACGGCCAGGCGCAGCGGCTCTATGAGCTCCTCTCCCATTACAATCTCCCCCTGACCATTTCGGAACGGGATTTCCCGTCGGAGCTGGGGCGCGGAGACAGGCGGCTTGACATCCTGGTGGGAGAGATTTCCCGCGGTTTCCGCCTCCCGGAAGATGGGCTGGTGGTCATCGCCGAAGAAGAGATTTTTGGCGCAAGGGTCAAGCGCCGCGGTCTTTCCGAGGTGCGGAAAAAGCAGCTCCTCACCTCCCTGGCCGAGCTGAAGCCGGGTGACCATATGGTTCACCTCGATTTCGGCGTCGGTATTTACCGCGGCTTGCAGCATCTTACCTTTTCGGGGATGGAGGGGGATTTCCTGCTCCTGGAATACGCCGGCGCCGACAAGCTCTACCTGCCGGTGGACCGGATCAACCTGGTGCAGCGCTATGTCGGGGCAGAGGGTGTCGAACCCCATGTGGACAAGCTGGGGGGCGCAGGCTGGGAGAAGACCAAGGCCAAGGCCAGGGCCGCTATCCAGGAGATGGCGGAGGAGCTGCTAAAGATCTATGCAGCACGACAGGTGGAGGAAGGGTACGCCTTTTCTCCACGGGACGAGCTCTACCGGGAATTCGAGGCGTCATTCGCCTTTGAGGAGACGCCCGACCAGCAGGCGGCGATTGATGACGTCTTGTGCGACATGGAGAGCAAGAGGCCGATGGATCGTCTCATCTGTGGTGATGTCGGCTACGGCAAGACCGAGGTTGCCATGCGTGGCGCCTTCAAGGCGGTGATGGACGGCAAGCAGGTGGCGGTGCTCGTCCCAACGACAGTGCTGGCCCAGCAGCATCTGGGAACCTTTGCCGAACGGTTCAAGGTCTATCCGGTCAAGATAGAAATGCTCTCCCGCTTCCGTTCGCCGAAGGAACAGAAACTGATCCTCGAAGGGGTGAAAAAGGGGGATGTGGACATCATCATCGGCACCCACCGCTTGCTGCAGAAGGATGTGGAATTCCGCGACCTGGGACTCCTCGTCATCGATGAGGAACAGCGTTTCGGCGTTGCGCACAAAGAGCGGCTAAAGAAATACCGGGCAATTGTTGATATCATGACCCTGACGGCAACCCCGATCCCGCGCACCCTCTACATGTCGCTGATGGGCATTCGCGACCTTTCCATCATCGACACGCCGCCGGTGGACCGCCTCTCAATCAAGACCTTTGTTGCGCGTGCCTCCGACGAGTTGATCCGCGAAGCAGTACTGAGGGAGTTGCGCCGTGGCGGCCAGGTATTTTACGTCCATAACCGGGTGCAGACCATTGCTGCCATGGCCGAGCATCTGCAGCGGATCGTCCCCGAAGCGCGGATCGCAGTGGGGCACGGCCAGTTGGAAGAGAAGTCCCTGGAAAGGGTCATGCTCGGCTTCATGCATGGCGAAACCAACCTGCTCCTCTGCACCACCATTATCGAGTCCGGGCTTGACATCCCGACCGCCAACACCCTGATCGTCAACCGGGCCGATACCTTCGGCCTCTCCCAGCTCTACCAGCTGCGCGGCCGGGTGGGTCGAGCCAAGCAGCGGGCCTACGCCTACTTCCTCATCCCCGGCGAAGGAGCCCTGTCCGCCGAGGCGCGGGAGCGACTCAAAATTATCCAGGAGCTTACCGAGCTGGGTGCCGGCTTTCGCATCGCCACCCACGACCTGGAGATCCGGGGGGGCGGTGATCTCCTCGGAGCCCGGCAGTCCGGCGACATCGCCGCAGTAGGCTTTGAGCTCTACACGGAACTCCTCGAAGAGGCGATCAGACAGATGAAGGGGGAAGAGCTGGTTGAACGGGTTGAACCGGAGATCAAGCTGCGCATCCCTGCCTTTGTCCCCGAGGATTATGTCCGCGAGCCGAATCAGCGGCTGATTATCTACAAGAAGCTGAGCCAGGCGGCATCAGAGGAGGATATCGGGGAAATAGCGGCGGAGCTGGTGGACCGCTTCGGCAAACTGCCGCTGGCAGCTGTTTACCTGCTTGAAGTGATGAAGTTGCGTGTCAGCCTGAAAGCGATGCTGGTCAAGGAGATCGAATTCGACGGCAAACGGCTCATTCTCTCCTTCCATCAGAAGACCCCGGTGTCACCCGACGTCATCATCGCCCTGATCCGCCAGCAGCCGAAGAAATACCAGTTCACCCCCGACTTCCGCCTCTATGCGGAACTGGCAGACAGCTCGTTCGACGGCATCCTCGGCGAGGCCAGAAATCTCTTGAAAAGGCTTGGCTGA
PROTEIN sequence
Length: 948
PLGELILLPSREVILSEEVLEEFAPRLKKRCDAIELPATRRRDLLEQLQNAIYPPGIEYLQPLFHPGLETLFDYAGQELVRVIYDPAALAAARENFAEELAAAEQRAFERDIISCDKADLFLDADSVTRLLAEGRRLEIPFLEVHDAGDVGEKISFKAEENSDLKLDISTDSEGVLRPLVAKLLAWQAAKSRVLMVCHQHGQAQRLYELLSHYNLPLTISERDFPSELGRGDRRLDILVGEISRGFRLPEDGLVVIAEEEIFGARVKRRGLSEVRKKQLLTSLAELKPGDHMVHLDFGVGIYRGLQHLTFSGMEGDFLLLEYAGADKLYLPVDRINLVQRYVGAEGVEPHVDKLGGAGWEKTKAKARAAIQEMAEELLKIYAARQVEEGYAFSPRDELYREFEASFAFEETPDQQAAIDDVLCDMESKRPMDRLICGDVGYGKTEVAMRGAFKAVMDGKQVAVLVPTTVLAQQHLGTFAERFKVYPVKIEMLSRFRSPKEQKLILEGVKKGDVDIIIGTHRLLQKDVEFRDLGLLVIDEEQRFGVAHKERLKKYRAIVDIMTLTATPIPRTLYMSLMGIRDLSIIDTPPVDRLSIKTFVARASDELIREAVLRELRRGGQVFYVHNRVQTIAAMAEHLQRIVPEARIAVGHGQLEEKSLERVMLGFMHGETNLLLCTTIIESGLDIPTANTLIVNRADTFGLSQLYQLRGRVGRAKQRAYAYFLIPGEGALSAEARERLKIIQELTELGAGFRIATHDLEIRGGGDLLGARQSGDIAAVGFELYTELLEEAIRQMKGEELVERVEPEIKLRIPAFVPEDYVREPNQRLIIYKKLSQAASEEDIGEIAAELVDRFGKLPLAAVYLLEVMKLRVSLKAMLVKEIEFDGKRLILSFHQKTPVSPDVIIALIRQQPKKYQFTPDFRLYAELADSSFDGILGEARNLLKRLG*