ggKbase home page

PLM4_5_b1_sep16_scaffold_14116_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(589..2151)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 Tax=Afipia sp. 1NLS2 RepID=D6V1N9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 513.0
  • Bit_score: 483
  • Evalue 2.00e-133
Glutathione-binding protein GsiB {ECO:0000313|EMBL:CEG10008.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 513.0
  • Bit_score: 485
  • Evalue 5.60e-134
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 512.0
  • Bit_score: 478
  • Evalue 1.40e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
GTGAAATTTTTCCGGATAGGCGCGCATCGTGTGCTGGCGATGCTGGCCTTAGCGTTGTGCGGCGGATTGACGCTCGTCGGTTCGCCCGCCGCGCTGGCGGCAAAGTCCGACAACACGCTGGTGGTGGCGTTTCCGCGCGAAGTGACGACGCTCGACGGGTTGTACTCGCGCAGTCGCGAGAATGACGTGCTGGGCCTCTTGACGGACGACGCGCTGTATTACGTCGATCCGCAGACCTTGAAAGCCGTCCCGCTCGCCGCAAAAGCGCACAAGTTCATCAACGACACGACGCTCGACGTCGAATTGCGGGAAGGCATCAAGTTTCACGACGGCAGCGAAATGACCGCCGAAGACGTCGCGTATTCTTTCAACTGGATCGTGAGCCCGGAAAGCAAGACGCTGTTTTCCGCGCGCATCGGGCACTGGCTGAAAAATGCGGAAGTGCGCGGCAAATATCTCGTGCGCTTCAACATGAAGCAGCCCAATGCGCTGGTGTTCTACGATTTCACCTATTATTCCAAGATCCGCAAGAAGGGCACCTATCACAAGGCGGACGGCAGCCTGGACCCGAATGCCGCCACTCGCGCGATCAACAGCACCGGACCGTACCGCGTCACCGAGTTCACCGCCGATCGCATCACCCTGCAGCGCTTCAAGGACTACCGCGGCGACAGCGCAAAAGGCCGCCCGCCGATGGAACGCATCATCATCCGCAGCATTCCGGACCAGAGCACGCAGGCCGCGGAGCTCATGAGCGGCGGGGTGCACTGGACCTTCAACATACCGACCGAGCTTGCCGAGGACGCCGCCCGCGGCGGCCGCGTGCGCCTCGTGCACGGGCCGTCGATGCGCGTGGAATTTCTGGTGCTCGACGCCGCCGGCATGGTGCAGCCGAAGGGGCCGCTCATGAAGAAGGCGGTGCGCCAGGCTCTCAACCACGCGATCGACCGCGCGGCGATCGTGAAGAACCTCGTCAAAGGCACGTCGCAGGTTTTGTACTCCGCGTGCAACCCGGTGCAGTTCGGGTGCGCGCAGGACGTGAAGAAATACGACTACAATCCGGCGCTCGCCAAAAAGCTGCTCGCTGAGGCCGGTTATCCGAATGGTTTCGATCTCGAGCTGTGGTCGGACCGCGAGCGCCCGGTCAACGAAGCGATCGTGCATCAATTGAACCAGGTCGGCGTGCGCGCGACGCTGCGCTTCGTGAAGCCGCCGGTGCTGGTAAAGGCCCGTAACGAAAAACAGGTGCCCGCCTATTACGGCTCGATCGGGTCGTTCAGCATTCCGGATGCCGGCGCGATCGTGCCCGATCATTTTCTGCCGGAATCCGACCGCAATTTTTCGCAGGACCCCGCGGTCGCGAAACTCGTGGATGCGGCGAATTCGACTTACGATCCGGCCAAGCGCCAGCAGTTTTTCCGCGACGCGCTACGCCGCATCGCCGAAGAAGCTTACTGGGTGCCGATCCTGACTTTCTCGGCCAACTATCTCGCCTCGAACGACGTCGAGTTCGAGCCGTGGAAGGACGGCATGGAACGGCTGTTTAAGATCCGGTGGAAATAA
PROTEIN sequence
Length: 521
VKFFRIGAHRVLAMLALALCGGLTLVGSPAALAAKSDNTLVVAFPREVTTLDGLYSRSRENDVLGLLTDDALYYVDPQTLKAVPLAAKAHKFINDTTLDVELREGIKFHDGSEMTAEDVAYSFNWIVSPESKTLFSARIGHWLKNAEVRGKYLVRFNMKQPNALVFYDFTYYSKIRKKGTYHKADGSLDPNAATRAINSTGPYRVTEFTADRITLQRFKDYRGDSAKGRPPMERIIIRSIPDQSTQAAELMSGGVHWTFNIPTELAEDAARGGRVRLVHGPSMRVEFLVLDAAGMVQPKGPLMKKAVRQALNHAIDRAAIVKNLVKGTSQVLYSACNPVQFGCAQDVKKYDYNPALAKKLLAEAGYPNGFDLELWSDRERPVNEAIVHQLNQVGVRATLRFVKPPVLVKARNEKQVPAYYGSIGSFSIPDAGAIVPDHFLPESDRNFSQDPAVAKLVDAANSTYDPAKRQQFFRDALRRIAEEAYWVPILTFSANYLASNDVEFEPWKDGMERLFKIRWK*