ggKbase home page

PLM4_5_b1_sep16_scaffold_890_7

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(6179..7363)

Top 3 Functional Annotations

Value Algorithm Source
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 395.0
  • Bit_score: 622
  • Evalue 2.70e-175
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:BAL53327.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 393.0
  • Bit_score: 547
  • Evalue 1.20e-152
gcdH; glutaryl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 390.0
  • Bit_score: 503
  • Evalue 3.00e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured Bacteroidetes bacterium → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCCCCGCCACGGCGGTGATTTCTACCAGATCGATTCGCTGCTGACCGACGAGGAACGCCAGATCCGCGATCACGTCGGCGAGTGGGTCGACGACCGCTACCTGCCGCTGGTCGAGGACGCGTACGAGAAGGCCTACTTCCCCGCCGACGTGATCCCCGAGCTCGCCGGCATGGGCCTGCTCGGCGCCACGCTGCCCGAGGAATACGGCTGCGCCGGCGTCAATCCGGTCGCCTACGGCCTGACGATGATGGAGCTCGAGCGCGGCGACTCGGGCCTGCGTTCGTTCGCGAGCGTGCAGGGCGCCCTGTGCATGTATCCGATCTTCGAGTTCGGCTCCGAGGAGCAGCGCAAGCACTGGCTGCCACGCATGGCGCGCGGCGAGGTGATCGGCTGCTTCGGACTCACCGAGCCCGACTTCGGCTCCGACCCCGCCGGCATGATCACGCGCGCGACGAAGGTGGACGGCGGCTGGCAACTGAACGGCGCCAAGATGTGGATCACCAACGGCACGGTCGCCGACGTCGCGATCGTGTGGGCCAAGCGCAAGGACGAGGCGGCGGGCCGCGACCGCATCATGGGCCTGCTGGTCGAGAAGGGCTCGAAGGGATTCTCGGCGCCCGAGCAGAAGCGCAAGCATTCGCTGCGCGCCTCGGTCACCAGCGAGCTGATCTTCCAGGACGTGTTCGTCCCCGATTCGCACGTGCTGCCGAAGGCCGAAGGACTCAAGGCGCCGCTGGCGTGCCTGAGCCAGGCGCGGTTCGGGATCGCATTCGGCGTGATCGGCGCGGCGATCTCGTGCTACGAGGCGGCGGTCCAGCATGCGAAGACCCGCATCATGTTCGGCAAGCCGATCGGCTCCTTCCAGCTGGTGCAGGAGCAGCTCGCGATCATGCTGACCGAGATCGTGAAGGCCCAGCTGCTGTCGATCCAGTGCGGACGAATGAAGGAGCGCGGCACGGTCGAGCCCCAGCACGTGTCGATGGCCAAGCGGAACAACTGCGAAATCGCGCTCGACGTGGCGCGCCGCGCCCGCGACGTGCTGGGCGCGAGCGGCATCACCGCCGAGTACCCGGTGATGCGCCACATGTGCAACCTCGAGTCGGTGAAGACCTACGAGGGCACGCACAACATCCACACCCTGGTGCTCGGCGAAGCGATTACAGGGTTGTCGGCGTATCGCTAA
PROTEIN sequence
Length: 395
MPRHGGDFYQIDSLLTDEERQIRDHVGEWVDDRYLPLVEDAYEKAYFPADVIPELAGMGLLGATLPEEYGCAGVNPVAYGLTMMELERGDSGLRSFASVQGALCMYPIFEFGSEEQRKHWLPRMARGEVIGCFGLTEPDFGSDPAGMITRATKVDGGWQLNGAKMWITNGTVADVAIVWAKRKDEAAGRDRIMGLLVEKGSKGFSAPEQKRKHSLRASVTSELIFQDVFVPDSHVLPKAEGLKAPLACLSQARFGIAFGVIGAAISCYEAAVQHAKTRIMFGKPIGSFQLVQEQLAIMLTEIVKAQLLSIQCGRMKERGTVEPQHVSMAKRNNCEIALDVARRARDVLGASGITAEYPVMRHMCNLESVKTYEGTHNIHTLVLGEAITGLSAYR*