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PLM4_5_b1_sep16_scaffold_2553_3

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3337..3864)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1N8_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 146
  • Evalue 2.50e-32
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 146
  • Evalue 7.10e-33
RNA polymerase sigma factor {ECO:0000313|EMBL:KIF16139.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 170.0
  • Bit_score: 146
  • Evalue 2.10e-32

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Taxonomy

Aphanocapsa montana → Aphanocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGACCGGCTGCAAGCCGGCGACACGCGAGCGCTCGAGGAGCTCTACGACCGTCACACGCCGCTGCTGTACGCGATCGTGCTGCGGATCGTGGGGCGCGCCGGGGACGCCGAGGAGGTTCTCCAGGACGTGTGGATGCACGCGTGGAAGCGCGCCGACACCTGGGACCCTTCACGCGGCTCGGTGGTGGCGTGGCTGCTGACCGTGGCGCGCAGCCGCGCGATCGACCGGATCCGCAGCGCCGCGTCCCGTCAGCGCGCCGAGACCGCGGCGCCCGCGCCCGAGCCTGCGCGGCTCGACCAGCCGGTCGCGAGCGCCGCACATCGCCAGCTCCACGAGCGCGTCACCGCCGCGCTCGCCACGCTGGCGCCGCAACAACGTCAGACACTCGAGCTCGCCTACTTCGGCGGGCTCTCGCAGTCCGAAATCGCCGAGCGGCTGGGAGCGCCACTCGGCACCGTGAAGTCGTGGACCCGGCAGGGACTCATGCGCATGCGTGAGATGGTGCCGGCGGAGGAGCAGACGTGA
PROTEIN sequence
Length: 176
MDRLQAGDTRALEELYDRHTPLLYAIVLRIVGRAGDAEEVLQDVWMHAWKRADTWDPSRGSVVAWLLTVARSRAIDRIRSAASRQRAETAAPAPEPARLDQPVASAAHRQLHERVTAALATLAPQQRQTLELAYFGGLSQSEIAERLGAPLGTVKSWTRQGLMRMREMVPAEEQT*