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PLM4_5_b1_sep16_scaffold_13428_2

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 407..1579

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 275.0
  • Bit_score: 315
  • Evalue 6.90e-83
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 316.0
  • Bit_score: 285
  • Evalue 1.70e-74
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 388.0
  • Bit_score: 441
  • Evalue 6.90e-121

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1173
ATGGACGACAAGCTTTCGAGTCTTCGCATCGAGCGCGGCACCCCCGCGCAGACCGCCGCGCGGCCCAGCCGCCGCGGTCTGTGGATCGTGCTGACCCTGGTGGTGGTGGCCGGCGCGGCCGCTGCGTTCCTGCTCCGGGGCCGGCCGCTCGAGGTCCAGACCGGTGAGGCGATCGCGACCGGCGGCTCGGTGGCGGGCGGCGGTATCTCGGCCAACGGCTATGTCGTCGCGCAGACCAAGGCGTCGGTCTCCGCCAAGGTGCCGGGCCGCCTCGCCTACCTCGGCGCGAGCGAGGGTTCGAAGGTGCGCCGTGGACAGGTGATCGCGCGGATCGAGAACGACGACTACGTCGCGGCCGCGGCGGCCGCACGCGCTTCGGTCGGCCAGACCCAGGCGCAGCTGGTCCAGGCGAATCGCGACTACGAACGGGCGAACAAGCTGAAACAGCAGGGCGTCATCTCGGAGGCCGAAGTCGAGAACGCCCAGACCCGGGTCGAGGTGATGAAGGCGCAGCTCGAGGCGGATCGTGCGCGGGCCGCGGTCGCGGCCGCATCGCTCGAGAACACCAACGTTCGCGCGCCGTTCGACGGCACCGTGCTGCGCAAGGACGCCGAGGTCGGCGAGATCGTCGCGCCGTCGTCGGCGGGCGGCGGGCTGACCCGCACCGCGATCGTGACGATGGCCGATCTCGCGACCCTCGAGGTCGAGGTCGACGTGAACGAGGCGTACATCGCGCAGGTTCGCAACGGTCAGGACGCGCGGGTGACCCTCGACGCCTACACCGACACGTCGTTCACCGGGCGGGTGCGGCAGGTGGTGCCGACCGCCGACCGGCAGAAGGCGACGGTGCTGGTGAAGGTCGCGATTCTCGACCGCGATCCACGGATCCTGCCGGAGATGGCGGCCAAGGTGGTGTTCACACCCGAAAGCGAGACGCCGGCGGCGGTGACGCCGCGCCGCGTGACGGTGCCGGCGGCGGCGGTGGTCGGCGAGGGTGCGGGCGCGAAGGTGTGGGTGGTGGAGAACCAGAAGGTGACCGGTCGCACGGTCGAGGTCGGCCGTGCGACCGGTGAACGAGTCGAGATCCGGAACGGGCTCGCCGGTGGCGAGCGGGTGGTGATTGCGCCGCCACCGGGTCTCAAAGACGGCCTGCGCGTGAAGGCCGCTTCGTAG
PROTEIN sequence
Length: 391
MDDKLSSLRIERGTPAQTAARPSRRGLWIVLTLVVVAGAAAAFLLRGRPLEVQTGEAIATGGSVAGGGISANGYVVAQTKASVSAKVPGRLAYLGASEGSKVRRGQVIARIENDDYVAAAAAARASVGQTQAQLVQANRDYERANKLKQQGVISEAEVENAQTRVEVMKAQLEADRARAAVAAASLENTNVRAPFDGTVLRKDAEVGEIVAPSSAGGGLTRTAIVTMADLATLEVEVDVNEAYIAQVRNGQDARVTLDAYTDTSFTGRVRQVVPTADRQKATVLVKVAILDRDPRILPEMAAKVVFTPESETPAAVTPRRVTVPAAAVVGEGAGAKVWVVENQKVTGRTVEVGRATGERVEIRNGLAGGERVVIAPPPGLKDGLRVKAAS*