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PLM4_65_b1_redo_sep16_scaffold_355

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Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_355_31
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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34037..34531
-----------------
DNA (495bp)
protein (165aa)
fabZ; 3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase bin=GWC2_Nitrospirae_57_13 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_65_b1_redo_sep16_scaffold_355_32
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

34528..35346
-----------------
DNA (819bp)
protein (273aa)
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIH1_CHLTF
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_355_33
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

35336..36349
-----------------
DNA (1014bp)
protein (338aa)
putative dehydrogenase-like protein bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative dehydrogenase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_355_34
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36424..37317
-----------------
DNA (894bp)
protein (298aa)
methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase bin=GWB2_Proteobacteria_55_19 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM4_65_b1_redo_sep16_scaffold_355_35
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

37350..38126
-----------------
DNA (777bp)
protein (259aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] bin=bin3_NC10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
stationary phase survival protein SurE
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM4_65_b1_redo_sep16_scaffold_355_36
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

38107..38778
-----------------
DNA (672bp)
protein (224aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protein-L-isoaspartate O-methyltransferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B350CD
protein-L-isoaspartate O-methyltransferase
PLM4_65_b1_redo_sep16_scaffold_355_37
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38784..39053
-----------------
DNA (270bp)
protein (90aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
Acylphosphatase Tax=Desulfovibrio sp. A2 RepID=G2HCY4_9DELT
yccX; acylphosphatase
PLM4_65_b1_redo_sep16_scaffold_355_38
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

39058..39576
-----------------
DNA (519bp)
protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367A594
PLM4_65_b1_redo_sep16_scaffold_355_trna_1
unknown

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39606..39679
-----------------
DNA (74bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_355_39
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

39742..40470
-----------------
DNA (729bp)
protein (243aa)
id=12554049 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_355_40
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

40545..41807
-----------------
DNA (1263bp)
protein (421aa)
thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase {ECO:0000313|EMBL:ABC20562.1}; EC=2.4.2.4 {ECO:0000313|EMBL:ABC20562.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Thymidine phosphorylase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG77_MOOTA
PLM4_65_b1_redo_sep16_scaffold_355_41
GWF2_TM6_30_66, TM6, Bacteria

Not on your lists

comp(41830..42855)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP29803.1}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_30_66.;"
PLM4_65_b1_redo_sep16_scaffold_355_42
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

42939..44204
-----------------
DNA (1266bp)
protein (422aa)
CinA-like protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX22_GRAMM
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
competence/damage-inducible protein CinA
PLM4_65_b1_redo_sep16_scaffold_355_43
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

44201..44821
-----------------
DNA (621bp)
protein (207aa)
membrane protein Tax=Sporolactobacillus inulinus RepID=UPI000255C360
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_b1_redo_sep16_scaffold_355_44
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

44821..45834
-----------------
DNA (1014bp)
protein (338aa)
glycerol 3-phosphate dehydrogenase (EC:1.1.1.94)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DF6C0
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_355_45
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45907..47448
-----------------
DNA (1542bp)
protein (514aa)
GMP synthase [glutamine-hydrolyzing] Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3L3_THEA1
GMP synthase, large subunit
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
PLM4_65_b1_redo_sep16_scaffold_355_46
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

47552..47887
-----------------
DNA (336bp)
protein (112aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
histidine ammonia-lyase Tax=Deinococcus apachensis RepID=UPI0003636607
histidine ammonia-lyase
Displaying items 31-47 of 47 in total

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